Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5527
(716 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 278 6e-75
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 278 6e-75
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 278 6e-75
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 278 6e-75
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 278 6e-75
Y14999-1|CAB40628.1| 1408|Drosophila melanogaster Bip2 protein p... 29 4.8
AY069276-1|AAL39421.1| 363|Drosophila melanogaster GM10839p pro... 29 4.8
AJ292191-1|CAC34474.1| 1408|Drosophila melanogaster TAFII155 pro... 29 4.8
AJ251945-1|CAB64265.1| 1406|Drosophila melanogaster BIP2 protein... 29 4.8
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 29 4.8
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 29 4.8
AE014135-85|AAF59342.1| 1406|Drosophila melanogaster CG2009-PA p... 29 4.8
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 29 4.8
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 29 4.8
X13331-1|CAA31709.1| 429|Drosophila melanogaster knirps protein... 29 8.4
AY118798-1|AAM50658.1| 429|Drosophila melanogaster GH19318p pro... 29 8.4
AE014296-3401|AAF51629.2| 429|Drosophila melanogaster CG4717-PA... 29 8.4
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 278 bits (681), Expect = 6e-75
Identities = 131/140 (93%), Positives = 134/140 (95%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 314
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 315 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 494
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 495 IGKPHTVPCKVTGKCGSVTV 554
IGKPHTVPCKVTGKCGSV+V
Sbjct: 157 IGKPHTVPCKVTGKCGSVSV 176
Score = 82.6 bits (195), Expect = 5e-16
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +1
Query: 556 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSACGSTGTLGKF 684
RLIPAPRGTGIVSAPVP+KLL MAG++DCYTSA GSTGTLG F
Sbjct: 177 RLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTLGNF 219
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 278 bits (681), Expect = 6e-75
Identities = 131/140 (93%), Positives = 134/140 (95%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 314
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 315 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 494
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 495 IGKPHTVPCKVTGKCGSVTV 554
IGKPHTVPCKVTGKCGSV+V
Sbjct: 157 IGKPHTVPCKVTGKCGSVSV 176
Score = 83.8 bits (198), Expect = 2e-16
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +1
Query: 556 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSACGSTGTLGKF 684
RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSA GSTGTLG F
Sbjct: 177 RLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 278 bits (681), Expect = 6e-75
Identities = 131/140 (93%), Positives = 134/140 (95%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 314
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 315 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 494
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 495 IGKPHTVPCKVTGKCGSVTV 554
IGKPHTVPCKVTGKCGSV+V
Sbjct: 157 IGKPHTVPCKVTGKCGSVSV 176
Score = 83.8 bits (198), Expect = 2e-16
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +1
Query: 556 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSACGSTGTLGKF 684
RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSA GSTGTLG F
Sbjct: 177 RLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 278 bits (681), Expect = 6e-75
Identities = 131/140 (93%), Positives = 134/140 (95%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 314
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 315 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 494
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 495 IGKPHTVPCKVTGKCGSVTV 554
IGKPHTVPCKVTGKCGSV+V
Sbjct: 157 IGKPHTVPCKVTGKCGSVSV 176
Score = 83.8 bits (198), Expect = 2e-16
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +1
Query: 556 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSACGSTGTLGKF 684
RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSA GSTGTLG F
Sbjct: 177 RLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 278 bits (681), Expect = 6e-75
Identities = 131/140 (93%), Positives = 134/140 (95%)
Frame = +3
Query: 135 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 314
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 315 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 494
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 495 IGKPHTVPCKVTGKCGSVTV 554
IGKPHTVPCKVTGKCGSV+V
Sbjct: 157 IGKPHTVPCKVTGKCGSVSV 176
Score = 83.8 bits (198), Expect = 2e-16
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +1
Query: 556 RLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSACGSTGTLGKF 684
RLIPAPRGTGIVSAPVPKKLL MAG++DCYTSA GSTGTLG F
Sbjct: 177 RLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
>Y14999-1|CAB40628.1| 1408|Drosophila melanogaster Bip2 protein
protein.
Length = 1408
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +3
Query: 519 CKVTGKC--GSVTVPADSCPSWY-WNCVCASS*KASSDGW 629
C GK GS + D C +WY W CV + +D W
Sbjct: 1345 CPACGKVDEGSAMIGCDGCDAWYHWICVGITFAPKDNDDW 1384
>AY069276-1|AAL39421.1| 363|Drosophila melanogaster GM10839p
protein.
Length = 363
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +3
Query: 519 CKVTGKC--GSVTVPADSCPSWY-WNCVCASS*KASSDGW 629
C GK GS + D C +WY W CV + +D W
Sbjct: 300 CPACGKVDDGSAMIGCDGCDAWYHWICVGITFAPKDNDDW 339
>AJ292191-1|CAC34474.1| 1408|Drosophila melanogaster TAFII155 protein
protein.
Length = 1408
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +3
Query: 519 CKVTGKC--GSVTVPADSCPSWY-WNCVCASS*KASSDGW 629
C GK GS + D C +WY W CV + +D W
Sbjct: 1345 CPACGKVDEGSAMIGCDGCDAWYHWICVGITFAPKDNDDW 1384
>AJ251945-1|CAB64265.1| 1406|Drosophila melanogaster BIP2 protein
protein.
Length = 1406
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +3
Query: 519 CKVTGKC--GSVTVPADSCPSWY-WNCVCASS*KASSDGW 629
C GK GS + D C +WY W CV + +D W
Sbjct: 1343 CPACGKVDEGSAMIGCDGCDAWYHWICVGITFAPKDNDDW 1382
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 29.5 bits (63), Expect = 4.8
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 409 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESH--TPSLARSPASVVL*QSRLIPAPRGT 582
RKSP + L+L+SC+ Q ++ T SE+ P +A + Q + P+ T
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPPPPVAAPKLKTPIKQEPVAPSSPRT 1095
Query: 583 GIVSAPVPKKLLQMA 627
A P + L+ A
Sbjct: 1096 TRSQAATPVEELRFA 1110
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 29.5 bits (63), Expect = 4.8
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 409 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESH--TPSLARSPASVVL*QSRLIPAPRGT 582
RKSP + L+L+SC+ Q ++ T SE+ P +A + Q + P+ T
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPPPPVAAPKLKTPIKQEPVAPSSPRT 1095
Query: 583 GIVSAPVPKKLLQMA 627
A P + L+ A
Sbjct: 1096 TRSQAATPVEELRFA 1110
>AE014135-85|AAF59342.1| 1406|Drosophila melanogaster CG2009-PA
protein.
Length = 1406
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +3
Query: 519 CKVTGKC--GSVTVPADSCPSWY-WNCVCASS*KASSDGW 629
C GK GS + D C +WY W CV + +D W
Sbjct: 1343 CPACGKVDDGSAMIGCDGCDAWYHWICVGITFAPKDNDDW 1382
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 29.5 bits (63), Expect = 4.8
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 409 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESH--TPSLARSPASVVL*QSRLIPAPRGT 582
RKSP + L+L+SC+ Q ++ T SE+ P +A + Q + P+ T
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPPPPVAAPKLKTPIKQEPVAPSSPRT 1095
Query: 583 GIVSAPVPKKLLQMA 627
A P + L+ A
Sbjct: 1096 TRSQAATPVEELRFA 1110
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 29.5 bits (63), Expect = 4.8
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 409 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESH--TPSLARSPASVVL*QSRLIPAPRGT 582
RKSP + L+L+SC+ Q ++ T SE+ P +A + Q + P+ T
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPPPPVAAPKLKTPIKQEPVAPSSPRT 1095
Query: 583 GIVSAPVPKKLLQMA 627
A P + L+ A
Sbjct: 1096 TRSQAATPVEELRFA 1110
>X13331-1|CAA31709.1| 429|Drosophila melanogaster knirps protein
protein.
Length = 429
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 643 SSPVHQPSEEAF*ELAQTQFQYHEGQESAGTVTEPHLPV 527
SSPV P F ++A +H+ Q+ PH+P+
Sbjct: 120 SSPVGSPHTPGFGDMAAHLHHHHQQQQQQQVPRHPHMPL 158
>AY118798-1|AAM50658.1| 429|Drosophila melanogaster GH19318p
protein.
Length = 429
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 643 SSPVHQPSEEAF*ELAQTQFQYHEGQESAGTVTEPHLPV 527
SSPV P F ++A +H+ Q+ PH+P+
Sbjct: 120 SSPVGSPHTPGFGDMAAHLHHHHQQQQQQQVPRHPHMPL 158
>AE014296-3401|AAF51629.2| 429|Drosophila melanogaster CG4717-PA
protein.
Length = 429
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 643 SSPVHQPSEEAF*ELAQTQFQYHEGQESAGTVTEPHLPV 527
SSPV P F ++A +H+ Q+ PH+P+
Sbjct: 120 SSPVGSPHTPGFGDMAAHLHHHHQQQQQQQVPRHPHMPL 158
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,229,098
Number of Sequences: 53049
Number of extensions: 812546
Number of successful extensions: 3562
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3062
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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