Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5526
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-15|CAB02769.1| 404|Caenorhabditis elegans Hypothetical p... 33 0.26
Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical pr... 32 0.46
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 30 1.8
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 29 3.2
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 29 3.2
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 29 3.2
Z81038-16|CAN99683.1| 400|Caenorhabditis elegans Hypothetical p... 28 5.6
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 5.6
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 28 5.6
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 28 5.6
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 5.6
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 5.6
U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 5.6
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 28 5.6
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 27 9.8
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 27 9.8
>Z81038-15|CAB02769.1| 404|Caenorhabditis elegans Hypothetical
protein C25A1.9a protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.26
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Frame = +1
Query: 397 DQYRLILTPPKDIPFYKDGYYKNNGIK-IIKQKHNYDEDKYDF----DFETENKIR---A 552
D R L P D+ F++DG + K I + Y++ + DF DF T K R A
Sbjct: 250 DSQRKGLLAPADLKFFRDGIFNEVFTKRIFEISITYEDGRIDFKAFVDFVTALKFRHTTA 309
Query: 553 EEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVDYTADENGFRPKV 693
K + + D+G+ + I DY ++N P+V
Sbjct: 310 SAKYHFEILDLKDDGLLDEEEIRSISSFQLQNLPDYVPEDNSVNPEV 356
>Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical
protein D2005.6 protein.
Length = 423
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 247 YGDSGKYIPTDEGKYIHIPNP-YIHID----NPYDGGFGPYAHDYEPYVGEATVQDQY 405
YGD+ + P+ + +Y + P Y H + + Y G +GPYA Y PY G + Y
Sbjct: 70 YGDTQQQHPSQQ-QYPYYGYPSYSHYNYQPASAYPGAYGPYAGAYGPYAGASGAYRPY 126
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 418 TPPKDIPFYK----DGYYKNNGIKIIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANS 585
T P P+Y D Y+ + +++ NY+E++ D+ E K + ++K KN
Sbjct: 508 TMPPSYPYYPGKIGDDYHNFESMDCKQERENYEENEDGDDYSEEKKQKKKKKKSKKNNKR 567
Query: 586 IDEGIASKG 612
+ + KG
Sbjct: 568 KGKKKSKKG 576
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 328 PYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDI 435
PY GG P + Y+ YV T +D Y+ ++ DI
Sbjct: 652 PYYGGVHPNSGKYKTYVDPTTYEDPYQALIEFTFDI 687
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 328 PYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDI 435
PY GG P + Y+ YV T +D Y+ ++ DI
Sbjct: 652 PYYGGVHPNSGKYKTYVDPTTYEDPYQALIEFTFDI 687
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 328 PYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDI 435
PY GG P + Y+ YV T +D Y+ ++ DI
Sbjct: 652 PYYGGVHPNSGKYKTYVDPTTYEDPYQALIEFTFDI 687
>Z81038-16|CAN99683.1| 400|Caenorhabditis elegans Hypothetical
protein C25A1.9b protein.
Length = 400
Score = 28.3 bits (60), Expect = 5.6
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Frame = +1
Query: 397 DQYRLILTPPKDIPFYKDGYYKNNGIK-IIKQKHNYDEDKYDF----DFETENKIR---A 552
D R L P D+ F++DG + K I + Y++ + DF DF T K R A
Sbjct: 250 DSQRKGLLAPADLKFFRDGIFNEVFTKRIFEISITYEDGRIDFKAFVDFVTALKFRHTTA 309
Query: 553 EEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVDYTADENGFRPKV 693
K + + D+G+ + I DY ++N P+V
Sbjct: 310 SAKYHFEILDLKDDGLLDEEEIRSI----LQNLPDYVPEDNSVNPEV 352
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 220 EDGKWHPYHYGDSGKYIPTDEG 285
+D KW PY YG+ PT G
Sbjct: 792 KDAKWSPYGYGNGSASFPTSLG 813
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 220 EDGKWHPYHYGDSGKYIPTDEG 285
+D KW PY YG+ PT G
Sbjct: 726 KDAKWSPYGYGNGSASFPTSLG 747
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 220 EDGKWHPYHYGDSGKYIPTDEG 285
+D KW PY YG+ PT G
Sbjct: 792 KDAKWSPYGYGNGSASFPTSLG 813
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 220 EDGKWHPYHYGDSGKYIPTDEG 285
+D KW PY YG+ PT G
Sbjct: 726 KDAKWSPYGYGNGSASFPTSLG 747
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 382 EATVQDQYRLILTPPKDIPFYKDGYY 459
EA D+YR + P K+IP + DGY+
Sbjct: 29 EAWDGDKYRELYCPSKNIPKWLDGYF 54
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 382 EATVQDQYRLILTPPKDIPFYKDGYY 459
EA D+YR + P K+IP + DGY+
Sbjct: 29 EAWDGDKYRELYCPSKNIPKWLDGYF 54
>U42848-3|AAA83609.1| 693|Caenorhabditis elegans Hypothetical
protein C31H1.1 protein.
Length = 693
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 391 VQDQYRLILTPPKDIPFYKDGYYK-NNGIKIIKQKHNYDEDKYDFDFETENKIR 549
VQ ++ ++PF K+ N+ I+ I Q HNYD KY F+ T + +R
Sbjct: 367 VQQAVNSLVNLIHELPFNKNERLDFNHTIEKIVQNHNYD-GKYKFELLTRHLMR 419
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 220 EDGKWHPYHYGDSGKYIPTDEG 285
+D KW PY YG+ PT G
Sbjct: 726 KDAKWSPYGYGNGSASFPTSLG 747
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 220 EDGKWHPYHYGDSGKYIPTDEG 285
+D KW PY YG+ PT G
Sbjct: 726 KDAKWSPYGYGNGSASFPTSLG 747
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +2
Query: 575 TLTPLTKV*PPKASTSTSVLTASCTEWTTPPTKT 676
T T +T V P +TSTS TAS T TTP T T
Sbjct: 275 TTTVVTTV-PTTTATSTSTSTASTTT-TTPSTST 306
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +2
Query: 575 TLTPLTKV*PPKASTSTSVLTASCTEWTTPPTKT 676
T T +T V P +TSTS TAS T TTP T T
Sbjct: 257 TTTVVTTV-PTTTATSTSTSTASTTT-TTPSTST 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,894,467
Number of Sequences: 27780
Number of extensions: 385572
Number of successful extensions: 1085
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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