BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5523
(413 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 24 1.9
DQ370047-1|ABD18608.1| 89|Anopheles gambiae putative secreted ... 24 2.5
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 24 2.5
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 3.3
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 3.3
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 4.4
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 5.8
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 24.2 bits (50), Expect = 1.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 311 PNTRL*NMQPQKNVTDSMDSLSHQSGNVS 225
PN+R NM P+ + +D + + Q+ N+S
Sbjct: 83 PNSRASNMSPESSASDQSAAYTLQNLNLS 111
>DQ370047-1|ABD18608.1| 89|Anopheles gambiae putative secreted
peptide protein.
Length = 89
Score = 23.8 bits (49), Expect = 2.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 71 CVLWDVCHLPFLSPSAVLDCDPLYEQY 151
C+L + L +A CDP+YE++
Sbjct: 9 CILLVLLALATRMTTAAPQCDPIYEEF 35
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 23.8 bits (49), Expect = 2.5
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Frame = +3
Query: 303 CIRSLSGFF------SVQVCAPYLNMEKIMGRG 383
C + GFF +V++ PYL++E+ GRG
Sbjct: 60 CTHLMYGFFGINEDATVRIIDPYLDLEENWGRG 92
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.4 bits (48), Expect = 3.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 138 RGSQSRTADGDRKGRWQT 85
RG+Q + DG R+ R QT
Sbjct: 272 RGTQDKAGDGTRRTRTQT 289
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.4 bits (48), Expect = 3.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 138 RGSQSRTADGDRKGRWQT 85
RG+Q + DG R+ R QT
Sbjct: 272 RGTQDKAGDGTRRTRTQT 289
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.0 bits (47), Expect = 4.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 377 SHNFLHIQIRSADLHTEKARQRPNTRL*NMQPQKN 273
SH L+ DL+ K Q P RL M+P+++
Sbjct: 2082 SHQILNPNWYVRDLYFFKRSQYPQLRLVEMKPEES 2116
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 22.6 bits (46), Expect = 5.8
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -1
Query: 347 SADLHTEKARQRPNTRL*NMQPQKNVTDSMDSLSHQSGNVSILRELH 207
SA +HT + + M+P++N +S ++ +H + SIL +H
Sbjct: 1678 SAAMHTVLSGPNDGSSQTEMKPKQNCVNSSNTYNHVA--ESILHAVH 1722
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,538
Number of Sequences: 2352
Number of extensions: 10522
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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