Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5523
(413 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M73747-1|AAA70232.1| 763|Homo sapiens thyroid stimulating hormo... 39 0.008
S49816-1|AAB24246.1| 253|Homo sapiens thyrotropin receptor-I pr... 34 0.16
S45272-1|AAB23390.2| 253|Homo sapiens thyrotropin receptor prot... 34 0.16
M32215-1|AAA61236.1| 764|Homo sapiens thyroid stimulatory hormo... 34 0.16
M31774-1|AAA36783.1| 764|Homo sapiens protein ( Human thyrotrop... 34 0.16
BC141970-1|AAI41971.1| 253|Homo sapiens thyroid stimulating hor... 34 0.16
BC127628-1|AAI27629.1| 274|Homo sapiens TSHR protein protein. 34 0.16
BC120973-1|AAI20974.1| 253|Homo sapiens thyroid stimulating hor... 34 0.16
BC120972-1|AAI20973.1| 231|Homo sapiens TSHR protein protein. 34 0.16
BC108653-1|AAI08654.1| 253|Homo sapiens thyroid stimulating hor... 34 0.16
BC063613-1|AAH63613.1| 253|Homo sapiens thyroid stimulating hor... 34 0.16
BC024205-1|AAH24205.1| 253|Homo sapiens thyroid stimulating hor... 34 0.16
BC009237-1|AAH09237.1| 253|Homo sapiens thyroid stimulating hor... 34 0.16
AY429111-1|AAR07906.1| 764|Homo sapiens thyroid stimulating hor... 34 0.16
AC007262-1|AAD31568.1| 174|Homo sapiens TSHR protein. 34 0.16
AB209207-1|BAD92444.1| 770|Homo sapiens thyroid stimulating hor... 34 0.16
AK090403-1|BAC03384.1| 186|Homo sapiens FLJ00287 protein protein. 31 2.0
AY603771-1|AAT37533.1| 269|Homo sapiens CD200 antigen protein. 30 2.6
>M73747-1|AAA70232.1| 763|Homo sapiens thyroid stimulating hormone
receptor protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 138 FTSNMSEEFQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSL 317
F++ + F TK YS F ++++ N ++ ++ A G+CN L L + S+
Sbjct: 133 FSNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSV 192
Query: 318 SG--FFSVQVCAPYLNMEKIM 374
G FF ++ A YLN K +
Sbjct: 193 QGYDFFGTKLDAVYLNKNKYL 213
>S49816-1|AAB24246.1| 253|Homo sapiens thyrotropin receptor-I
protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>S45272-1|AAB23390.2| 253|Homo sapiens thyrotropin receptor
protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>M32215-1|AAA61236.1| 764|Homo sapiens thyroid stimulatory hormone
receptor protein.
Length = 764
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>M31774-1|AAA36783.1| 764|Homo sapiens protein ( Human thyrotropin
receptor (TSH) mRNA, complete cds. ).
Length = 764
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>BC141970-1|AAI41971.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>BC127628-1|AAI27629.1| 274|Homo sapiens TSHR protein protein.
Length = 274
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>BC120973-1|AAI20974.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>BC120972-1|AAI20973.1| 231|Homo sapiens TSHR protein protein.
Length = 231
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>BC108653-1|AAI08654.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>BC063613-1|AAH63613.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>BC024205-1|AAH24205.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>BC009237-1|AAH09237.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>AY429111-1|AAR07906.1| 764|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 764
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 141 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 200
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 201 KLDAVYLNKNKYL 213
>AC007262-1|AAD31568.1| 174|Homo sapiens TSHR protein.
Length = 174
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 84 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 143
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 144 KLDAVYLNKNKYL 156
>AB209207-1|BAD92444.1| 770|Homo sapiens thyroid stimulating
hormone receptor variant protein.
Length = 770
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 162 FQHPTKAYSGKSSFDMKLSQNRHVAALVRKAVHGICNIFLRLHILKACIRSLSG--FFSV 335
F TK YS F ++++ N ++ ++ A G+CN L L + S+ G F
Sbjct: 147 FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGT 206
Query: 336 QVCAPYLNMEKIM 374
++ A YLN K +
Sbjct: 207 KLDAVYLNKNKYL 219
>AK090403-1|BAC03384.1| 186|Homo sapiens FLJ00287 protein protein.
Length = 186
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 50 SPTISWDCVLWDVCHLPFLS-PSAVLDCDPLYEQYVR-RIPAPH 175
+P ++W CVL LP P L PL Q + ++PAPH
Sbjct: 100 APRLAWSCVLHSPLSLPLSKLPPLYLTHSPLRHQSTQAQVPAPH 143
>AY603771-1|AAT37533.1| 269|Homo sapiens CD200 antigen protein.
Length = 269
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 365 LHIQIRSADLH-TEKARQRPNTRL*NMQPQKNVTDSMDSLSHQSGNVSILRELHIK 201
LH + L+ T A RP + P+ + DS +LSH +G S+ LHIK
Sbjct: 147 LHYKFSEDHLNITCSATARPAPMVFWKVPRSGIEDSTVTLSHPNGTTSVTSILHIK 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,407,986
Number of Sequences: 237096
Number of extensions: 1384632
Number of successful extensions: 3151
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3145
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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