Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5519
         (627 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118397-1|AAM48426.1|  150|Drosophila melanogaster RE57454p pro...    31   0.97 
AE014134-1598|AAF52740.2|  150|Drosophila melanogaster CG13102-P...    31   0.97 
AE013599-979|AAF58868.1|  350|Drosophila melanogaster CG12133-PA...    29   6.8  

>AY118397-1|AAM48426.1|  150|Drosophila melanogaster RE57454p
           protein.
          Length = 150

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 156 DSKVPIVVTERGELAKKLSYYIKVFNTNAGNINKKVYGC 272
           D K P  VT     A + SYY+ V++ N GN+    + C
Sbjct: 33  DCKSPKKVTCTNAAANETSYYLGVYHQNVGNLTSTRFDC 71


>AE014134-1598|AAF52740.2|  150|Drosophila melanogaster CG13102-PA
           protein.
          Length = 150

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 156 DSKVPIVVTERGELAKKLSYYIKVFNTNAGNINKKVYGC 272
           D K P  VT     A + SYY+ V++ N GN+    + C
Sbjct: 33  DCKSPKKVTCTNAAANETSYYLGVYHQNVGNLTSTRFDC 71


>AE013599-979|AAF58868.1|  350|Drosophila melanogaster CG12133-PA
           protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
 Frame = +1

Query: 283 HPNN*TGFGEIMYRNGLYHIN-----VRYFLFHCCPLI 381
           HP N T   +  YRN L +IN     + + +F CCP++
Sbjct: 5   HPRNMTNDQKSQYRNKLCNINPFAHELVHMVFTCCPMV 42


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,444,871
Number of Sequences: 53049
Number of extensions: 538653
Number of successful extensions: 837
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)