Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5508
         (450 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005125-1|AAH05125.1|  688|Homo sapiens NOL10 protein protein.        29   7.3  
AK024137-1|BAB14836.1|  638|Homo sapiens protein ( Homo sapiens ...    29   7.3  
AC007314-1|AAK52071.2|  579|Homo sapiens unknown protein.              29   7.3  

>BC005125-1|AAH05125.1|  688|Homo sapiens NOL10 protein protein.
          Length = 688

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 103 LPSVCLSPTLAKATTANDATKITVYFIVVL 14
           L  VCL P      TAN+  K+ +Y+I VL
Sbjct: 315 LNDVCLYPNSGMLLTANETPKMGIYYIPVL 344


>AK024137-1|BAB14836.1|  638|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14075 fis, clone HEMBB1001905, weakly similar to
           TRICHOHYALIN. ).
          Length = 638

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 103 LPSVCLSPTLAKATTANDATKITVYFIVVL 14
           L  VCL P      TAN+  K+ +Y+I VL
Sbjct: 265 LNDVCLYPNSGMLLTANETPKMGIYYIPVL 294


>AC007314-1|AAK52071.2|  579|Homo sapiens unknown protein.
          Length = 579

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 103 LPSVCLSPTLAKATTANDATKITVYFIVVL 14
           L  VCL P      TAN+  K+ +Y+I VL
Sbjct: 206 LNDVCLYPNSGMLLTANETPKMGIYYIPVL 235


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,240,207
Number of Sequences: 237096
Number of extensions: 795150
Number of successful extensions: 1601
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)