Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5501
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    26   0.97 
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    26   0.97 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   6.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.1  

>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 10  STISFSLIEVSH*PEFLANAPSE 78
           +TISF+L E+SH PE +A    E
Sbjct: 306 ATISFTLHELSHNPEAMAKLQQE 328


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 10  STISFSLIEVSH*PEFLANAPSE 78
           +TISF+L E+SH PE +A    E
Sbjct: 306 ATISFTLHELSHNPEAMAKLQQE 328


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = -1

Query: 427 YLYYLGGTNDK-TNYKFNICYFMTHS*LSWNFLPLFL-YCFLVNIEPILFRCYFIAFFSN 254
           +L+ + GT        F I  F++ S L  + +PLF+ + F+  +  +LF   F  FFS 
Sbjct: 17  FLFVVRGTGKPFLPTSFLIYCFVSPSCLECSSVPLFINFIFMFLLHFVLFSFSF-PFFSF 75

Query: 253 GHVCLCTVLYVRLTQFIVNQL 191
               L +   + L + +   L
Sbjct: 76  APCTLASATEISLPELVTRSL 96


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = +2

Query: 194 LINDKLSKSDIQDGTQAHVSIRKECDKITTK*NRFNIDEKTIQKQW*EVPRKLR 355
           L+N     + +    Q H  + +ECDKI  +  +     K +Q++  E+  + R
Sbjct: 604 LLNRSTDHALLAQKRQEHQRLVRECDKIRNQRGQIENSIKELQERCAELREQKR 657


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 585 LIEFSHLSSSHLPRFDCIWQNN 650
           L++ +H+++SH    D ++ NN
Sbjct: 272 LVQLNHINNSHGRMLDLLYANN 293


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,589
Number of Sequences: 2352
Number of extensions: 12366
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)