Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5501
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81533-2|CAB04342.1|  432|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z83216-2|CAB05673.1|  315|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U58742-4|AAB36856.1|  242|Caenorhabditis elegans Activated in bl...    27   9.6  
U40952-4|AAN39681.1|  131|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AF016436-4|AAC25895.2|  331|Caenorhabditis elegans Serpentine re...    27   9.6  

>Z81533-2|CAB04342.1|  432|Caenorhabditis elegans Hypothetical
           protein F36G9.3 protein.
          Length = 432

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 357 ILNFLGTSYHCFCIVFSSILNLFYFVVILS 268
           I  F  +   CF  +FSS+++L++ + ILS
Sbjct: 371 IFKFFESLLSCFTFIFSSLISLYWVLTILS 400


>Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical
           protein F53F8.1 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 439 SSFIYLYYLGGTNDKTNYKFNICY 368
           SSF+Y  +LGG   K+  KF++CY
Sbjct: 8   SSFLYFLFLGGK--KSLLKFSVCY 29


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
           protein C08G9.2 protein.
          Length = 2224

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 243 ACVPSCMSDLLSLSLINCERKFCSASCQY 157
           +C   C SD     +  C R+ CS SC Y
Sbjct: 525 SCATECHSDSQCAGMKRCCRQGCSTSCMY 553


>Z83216-2|CAB05673.1|  315|Caenorhabditis elegans Hypothetical
           protein C08F11.2 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 38  FLTNPSFSLMHPLNFISRFSGFKRIHYFKFIT 133
           F  +  F ++  L+FI R  GFK+I Y  F+T
Sbjct: 68  FFISLVFVILQDLSFIIRNIGFKKIEYEIFLT 99


>U58742-4|AAB36856.1|  242|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 3 protein.
          Length = 242

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = -2

Query: 300 LNLFYFVVILSHSFRMDTCA--CVPSCMSDLLSLSLINCERKFCSASCQ 160
           +  F F V +  S  +  CA  C  SC +   S   +N  +  C  +CQ
Sbjct: 1   MRFFAFAVFIVSSILLVECAPACQQSCQNQCKSAPFVNQCQSSCQQNCQ 49


>U40952-4|AAN39681.1|  131|Caenorhabditis elegans Hypothetical
           protein C03B1.6 protein.
          Length = 131

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 312 FSSILNLFYFVVILSHSF 259
           F  +LNLF+FVV+LS+ F
Sbjct: 9   FFFLLNLFFFVVVLSYFF 26


>AF016436-4|AAC25895.2|  331|Caenorhabditis elegans Serpentine
           receptor, class j protein39 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = -1

Query: 433 FIYLYYLGGTNDKTNYKFNICYFMTHS*LSWNFLPLFLYCFLVNIEPILFRCYFIAFFSN 254
           FIYL +   +N   NY+F + YF   + L+++ + +     +V I+ I +R  FI    +
Sbjct: 25  FIYLIFTESSNKFGNYRFLLLYFALFN-LTYSVVNI-----VVPIDIITYRYCFIVILRD 78

Query: 253 G 251
           G
Sbjct: 79  G 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,144,991
Number of Sequences: 27780
Number of extensions: 321154
Number of successful extensions: 701
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)