Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5498
         (342 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ...    30   1.6  
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro...    30   1.6  
AB051471-1|BAB21775.1|  762|Homo sapiens KIAA1684 protein protein.     30   1.6  

>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44709 fis, clone BRACE3019570, highly  similar
           to Rattus norvegicus SNAP-25-interacting protein (SNIP).
           ).
          Length = 1012

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 108 SRGLAIGQAYNSDGGVSQANANVIGGVSQAYGSSSNGGHLARDGLFYPG 254
           SRG  + Q++  D G S   A   GG +++ GS+S  G  A     +PG
Sbjct: 372 SRGSPVRQSFRKDSGSSSVFAESPGGKTRSAGSASTAG--APPSELFPG 418


>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting
           protein protein.
          Length = 1183

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 108 SRGLAIGQAYNSDGGVSQANANVIGGVSQAYGSSSNGGHLARDGLFYPG 254
           SRG  + Q++  D G S   A   GG +++ GS+S  G  A     +PG
Sbjct: 500 SRGSPVRQSFRKDSGSSSVFAESPGGKTRSAGSASTAG--APPSELFPG 546


>AB051471-1|BAB21775.1|  762|Homo sapiens KIAA1684 protein protein.
          Length = 762

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 108 SRGLAIGQAYNSDGGVSQANANVIGGVSQAYGSSSNGGHLARDGLFYPG 254
           SRG  + Q++  D G S   A   GG +++ GS+S  G  A     +PG
Sbjct: 79  SRGSPVRQSFRKDSGSSSVFAESPGGKTRSAGSASTAG--APPSELFPG 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,758,344
Number of Sequences: 237096
Number of extensions: 951773
Number of successful extensions: 2395
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2394
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)