Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5496
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 291 8e-80
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 195 4e-51
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 195 4e-51
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 193 2e-50
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 155 5e-39
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 155 7e-39
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 149 3e-37
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 145 6e-36
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 142 4e-35
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 141 9e-35
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 141 9e-35
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 139 4e-34
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 136 2e-33
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 134 1e-32
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 132 3e-32
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 122 5e-29
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 113 3e-26
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 106 2e-24
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 99 3e-22
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 97 1e-21
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 46 6e-06
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 33 0.027
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 33 0.027
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 33 0.027
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 33 0.027
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 33 0.036
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 31 0.15
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.34
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 30 0.34
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 30 0.34
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 28 1.4
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 1.8
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 1.8
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 27 2.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 2.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.1
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.1
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 26 4.2
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 26 4.2
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 26 4.2
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 26 5.5
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 26 5.5
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 26 5.5
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 26 5.5
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 5.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 7.3
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.3
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 7.3
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 25 9.6
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 25 9.6
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.6
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 25 9.6
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 9.6
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 291 bits (713), Expect = 8e-80
Identities = 142/203 (69%), Positives = 165/203 (81%)
Frame = +2
Query: 47 VLNSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHP 226
VL+SL V+MDNFR+A+ S+PSALRETVVEVPNV W DIGGLE VKREL+E VQ PV +
Sbjct: 461 VLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYA 520
Query: 227 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR 406
+KFL+FG+ PS+GVLF+GPPG GKTLLAKAIANEC ANFISVKGPELL+MWFGESE+NVR
Sbjct: 521 EKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVR 580
Query: 407 DIFDKARSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSS 586
DIFDKAR+A+PCV+F DELDSIAK V+NQ+LTEMDG+ +K
Sbjct: 581 DIFDKARAAAPCVVFLDELDSIAK-ARGASAGDSGGGDRVVNQLLTEMDGV-NSKKNVFV 638
Query: 587 SGATNRPDIIDPAILRPGRLDQL 655
GATNRPD IDPA++RPGRLDQL
Sbjct: 639 IGATNRPDQIDPALMRPGRLDQL 661
Score = 148 bits (359), Expect = 6e-37
Identities = 74/169 (43%), Positives = 104/169 (61%)
Frame = +2
Query: 146 VTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 325
V + DIGG +++ELV+ P+ HP F G++P RG+L YGPPG GKTL+A+A+AN
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 326 ECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXXXXXXXXX 505
E A F + GPE+++ GESE+N+R F++A SP ++F DE+DSIA
Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIA---PKREKTN 337
Query: 506 XXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRLDQ 652
V++Q+LT MDGM + ATNRP+ IDPA+ R GR D+
Sbjct: 338 GEVERRVVSQLLTLMDGM-KARSNVVVMAATNRPNSIDPALRRFGRFDR 385
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 195 bits (476), Expect = 4e-51
Identities = 96/198 (48%), Positives = 132/198 (66%)
Frame = +2
Query: 62 AVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLK 241
AV MD+ +A++ SA+RE ++E PNV W+DIGG E VK++L+E V++P+ H + F +
Sbjct: 517 AVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSR 576
Query: 242 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDK 421
G++P +GVL YGPPGC KT+ AKAIA E NFI+VKGPEL + GESE VR +F K
Sbjct: 577 LGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQK 636
Query: 422 ARSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATN 601
AR ASP V+FFDE+D++ V+ +L E+DG+ + ATN
Sbjct: 637 ARQASPSVIFFDEIDALT-----ANRGEDNSSDRVVAALLNELDGI-EALRNVLVLAATN 690
Query: 602 RPDIIDPAILRPGRLDQL 655
RPD+IDPA++RPGRLD+L
Sbjct: 691 RPDMIDPALMRPGRLDRL 708
Score = 130 bits (315), Expect = 1e-31
Identities = 63/169 (37%), Positives = 103/169 (60%)
Frame = +2
Query: 146 VTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 325
VT++ IGGL+ +++++V+ P ++P+ F F + P RGVL YGPPG GKT++ +A+A
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 326 ECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXXXXXXXXX 505
E A ++ GP ++ + GE+E+ +R IF+ AR+ P ++F DE+D++A
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALA---PKRTEDV 392
Query: 506 XXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRLDQ 652
+ +LT +DGM K + ATNRP+ ID A+ RPGRL++
Sbjct: 393 SEAESRAVATLLTLLDGMANAGKVVVIA-ATNRPNSIDEALRRPGRLEK 440
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 195 bits (476), Expect = 4e-51
Identities = 96/201 (47%), Positives = 132/201 (65%)
Frame = +2
Query: 50 LNSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPD 229
L LA+ +F A+ K PS+ RE VP V+W +IG L+ ++ ELQ + P++ P+
Sbjct: 457 LEPLAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPE 516
Query: 230 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRD 409
+ G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS++GPELL + GESE VR
Sbjct: 517 LYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQ 576
Query: 410 IFDKARSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSS 589
+F +AR++SPCV+FFDELD++ V+N +LTE+DG+ + +
Sbjct: 577 VFLRARASSPCVIFFDELDAMV---PRRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIA 633
Query: 590 GATNRPDIIDPAILRPGRLDQ 652
ATNRPDIIDPA+LRPGRLD+
Sbjct: 634 -ATNRPDIIDPAMLRPGRLDK 653
Score = 146 bits (355), Expect = 2e-36
Identities = 79/195 (40%), Positives = 114/195 (58%), Gaps = 5/195 (2%)
Frame = +2
Query: 83 RYAMTKSSPSALRETVVEVPN-VTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPS 259
R + T S E E P+ ++ +DIGGL+ EL ELV P++HP+ + G+ P
Sbjct: 149 RRSKTNGSKRQKAEANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPP 208
Query: 260 RGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASP 439
RGVL +GPPGCGKT+LA A+ANE FIS+ P +++ GESE VR++F++A+S +P
Sbjct: 209 RGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAP 268
Query: 440 CVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSS----GATNRP 607
C++F DE+D++ ++ Q LT MD + EKT GATNRP
Sbjct: 269 CLMFIDEIDAVT---PKRESAQREMERRIVAQFLTCMDELS-FEKTDGKPVLVIGATNRP 324
Query: 608 DIIDPAILRPGRLDQ 652
D +D A+ R GR D+
Sbjct: 325 DSLDSALRRAGRFDR 339
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 193 bits (471), Expect = 2e-50
Identities = 93/178 (52%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Frame = +2
Query: 125 TVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTL 304
T+ VP V W DIGGLE K L++ +Q P++ P+ F + G++P GVL YGPPG GKTL
Sbjct: 645 TIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTL 703
Query: 305 LAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXX 484
LAKA+A E F+S+KGPELL M+ GESEANVR++F+KAR++SPCV+FFDELDSIA
Sbjct: 704 LAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIA-PH 762
Query: 485 XXXXXXXXXXXXXVINQILTEMDGMGR-QEKTSSSSGATNRPDIIDPAILRPGRLDQL 655
V++Q+L E+D + + K GATNRPD++DP++LRPGR D+L
Sbjct: 763 RGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKL 820
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 155 bits (376), Expect = 5e-39
Identities = 80/184 (43%), Positives = 111/184 (60%)
Frame = +2
Query: 101 SSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYG 280
SS S LR E P+V++ D+GGL+ K+E++E V+ P+ D + + G+ P RGVL YG
Sbjct: 118 SSISMLRPD--ERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYG 175
Query: 281 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 460
PPG GKT+L KA+AN ANFI V G E + + GE VRD+F AR +P ++F DE
Sbjct: 176 PPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDE 235
Query: 461 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPG 640
+D+IA ++ ++LT+MDG Q ATNR D +DPA+LRPG
Sbjct: 236 IDAIATKRFDAQTGADREVQRILIELLTQMDGFD-QGANVKVIMATNRADTLDPALLRPG 294
Query: 641 RLDQ 652
RLD+
Sbjct: 295 RLDR 298
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 155 bits (375), Expect = 7e-39
Identities = 78/183 (42%), Positives = 113/183 (61%)
Frame = +2
Query: 107 PSALRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPP 286
P LR+ ++ W DI G++ K ++++++ PV++ + + ++ G+L +G P
Sbjct: 590 PLQLRKAKFVKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYP 649
Query: 287 GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELD 466
GCGKT LA AI++ FIS+KGPELL + G+SE VRD+F +A+ A PCVLFFDE D
Sbjct: 650 GCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFD 709
Query: 467 SIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRL 646
S+A V+NQILT+MDG + + AT RPD+IDPA+LRPGRL
Sbjct: 710 SVA---PRRGQDSTGVTDRVVNQILTQMDGAESLDGVYIVA-ATTRPDMIDPALLRPGRL 765
Query: 647 DQL 655
D+L
Sbjct: 766 DKL 768
Score = 31.1 bits (67), Expect = 0.15
Identities = 21/120 (17%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Frame = +2
Query: 116 LRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCG 295
++ + ++ + T++ G++ L P H ++ + + + GP GCG
Sbjct: 325 VKNPIQDIKITSDTNVPVNAGIRNNSPRLSMQPFPHEFAQVRNAVFLHQNIYINGPKGCG 384
Query: 296 KTLLAKAIANECQANFI----SVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDEL 463
K+ L ++ + N I V E+ F + ++ ++F +A P +++ D++
Sbjct: 385 KSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQAERYEPSIIYLDDV 444
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 149 bits (361), Expect = 3e-37
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 5/203 (2%)
Frame = +2
Query: 59 LAVSMDNFRYAMT-----KSSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEH 223
+ V D +YA+ K PS V E P+VT+ D+GG + L+E+V+ P+
Sbjct: 142 MRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLS 201
Query: 224 PDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 403
P++F+K G+ P +G++ YGPPG GKTL A+A+AN A FI V G EL+ + GE V
Sbjct: 202 PERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMV 261
Query: 404 RDIFDKARSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSS 583
R++F+ AR+ C++FFDE+D+I + +++T++DG +
Sbjct: 262 RELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKV 321
Query: 584 SSGATNRPDIIDPAILRPGRLDQ 652
ATNRP+ +D A++RPGR+D+
Sbjct: 322 LF-ATNRPNTLDEALMRPGRIDR 343
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 145 bits (351), Expect = 6e-36
Identities = 68/182 (37%), Positives = 109/182 (59%)
Frame = +2
Query: 107 PSALRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPP 286
P ++ + ++++ +GGL REL+E+++ P+++P+ FL+ G++P +GVL YGPP
Sbjct: 116 PLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPP 175
Query: 287 GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELD 466
G GKTLLA+A+A NF+ V ++ + GES +R++F A+ PCV+F DE+D
Sbjct: 176 GTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEID 235
Query: 467 SIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRL 646
+I + ++L +MDG +T ATNRPD +DPA+LRPGRL
Sbjct: 236 AIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIM-ATNRPDTLDPALLRPGRL 294
Query: 647 DQ 652
D+
Sbjct: 295 DR 296
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 142 bits (344), Expect = 4e-35
Identities = 76/205 (37%), Positives = 119/205 (58%), Gaps = 6/205 (2%)
Frame = +2
Query: 56 SLAVSMDNFRYAMTKSSPSALRETV----VE-VPNVTWTDIGGLEGVKRELQELVQYPVE 220
++ V++ N Y + K P+ + V VE +P+ T+ +GGLE +E++E+++ PV+
Sbjct: 107 NIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVK 166
Query: 221 HPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 400
HP+ F G+ +G+L YGPPG GKTLLA+A+A+ FI V G EL+ + GE
Sbjct: 167 HPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRM 226
Query: 401 VRDIFDKARSASPCVLFFDELDSI-AKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKT 577
VR++F AR +P ++F DE+DSI + + ++L ++DG K
Sbjct: 227 VRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGF-EATKN 285
Query: 578 SSSSGATNRPDIIDPAILRPGRLDQ 652
ATNR DI+DPA+LRPGR+D+
Sbjct: 286 IKVIMATNRIDILDPALLRPGRIDR 310
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 141 bits (341), Expect = 9e-35
Identities = 69/175 (39%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Frame = +2
Query: 143 NVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 322
++++ +GGL+ +L+E+V P+ +P+ F +F MQP RGVLF+GPPG GKTL+A+A+A
Sbjct: 262 SLSFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALA 321
Query: 323 NEC-----QANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXXX 487
C + +F KG + L+ W GE+E +R +F++A+S P ++FFDE+D +A
Sbjct: 322 AACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLA---P 378
Query: 488 XXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRLDQ 652
+++ +L MDGM + + GATNRPD +DPA+ RPGR D+
Sbjct: 379 VRSSKQEQIHASIVSTLLALMDGMESRGQV-IIIGATNRPDAVDPALRRPGRFDR 432
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 141 bits (341), Expect = 9e-35
Identities = 64/173 (36%), Positives = 103/173 (59%)
Frame = +2
Query: 134 EVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAK 313
+ P ++ DIGGLE +E++E V+ P+ HP+ + + G++P +GV+ YG PG GKTLLAK
Sbjct: 184 KAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAK 243
Query: 314 AIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXXXXX 493
A+AN+ A F+ V G EL+ + G+ VR +F+ A SP ++F DE+D+I
Sbjct: 244 AVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDA 303
Query: 494 XXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRLDQ 652
+ ++L ++DG ++ ATNR +DPA++RPGR+D+
Sbjct: 304 QSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDR 356
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 139 bits (336), Expect = 4e-34
Identities = 69/170 (40%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
Frame = +2
Query: 146 VTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 325
+ + D+ G++ K E+ E V++ +++P + + G + RG + GPPG GKTLLAKA A
Sbjct: 293 IKFADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAG 351
Query: 326 ECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAK-XXXXXXXX 502
E F+SV G E L M+ G + VRD+F AR +PC++F DE+D+I K
Sbjct: 352 EANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFG 411
Query: 503 XXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRLDQ 652
+NQ+L EMDG E +G TNRPD++DPA+LRPGR D+
Sbjct: 412 SNDERESTLNQLLVEMDGFTSSEHIVVFAG-TNRPDVLDPALLRPGRFDR 460
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 136 bits (330), Expect = 2e-33
Identities = 68/175 (38%), Positives = 100/175 (57%)
Frame = +2
Query: 128 VVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLL 307
V E P ++DIGGL EL E + P++ DKF K G++P +G L +GPPG GKTLL
Sbjct: 176 VDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLL 235
Query: 308 AKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXXX 487
A+A A + A F+ + P+L+ M+ G+ VRD F A+ SP ++F DELD+I
Sbjct: 236 ARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRF 295
Query: 488 XXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRLDQ 652
+ ++L ++DG ++ + ATNR D +DPA+LR GRLD+
Sbjct: 296 DSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIA-ATNRVDTLDPALLRSGRLDR 349
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 134 bits (324), Expect = 1e-32
Identities = 72/180 (40%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Frame = +2
Query: 98 KSSPSALRETV-VEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLF 274
K SAL + VE PNV W DI GLE K L+E V P++ P F G +P G+L
Sbjct: 109 KKLRSALTSAILVEKPNVRWDDIAGLENAKEALKETVLLPIKLPQLF-SHGRKPWSGILL 167
Query: 275 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFF 454
YGPPG GK+ LAKA+A E + F S+ +L++ W GESE VR +F+ AR P ++F
Sbjct: 168 YGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFI 227
Query: 455 DELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILR 634
DE+DS+ + + L +M+G+G+ E GATN P +D AI R
Sbjct: 228 DEIDSLC---GSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR 284
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 132 bits (320), Expect = 3e-32
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
Frame = +2
Query: 143 NVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 322
N+ + IGGLE + +L+E+V P+ +P+ FL + P RGVLF+GPPG GKTL+A+ +A
Sbjct: 368 NLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLA 427
Query: 323 NEC-----QANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXXX 487
C + +F KG + L+ W GE+E +R +F++AR P ++FFDE+D +A
Sbjct: 428 ANCSTKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLA---P 484
Query: 488 XXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILRPGRLDQ 652
+++ +L MDG+ + + GATNRP+ +DPA+ RPGR D+
Sbjct: 485 IRSSKQEQTHSSIVSTLLALMDGLDTRGQV-VVIGATNRPNDLDPALRRPGRFDR 538
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 122 bits (294), Expect = 5e-29
Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
Frame = +2
Query: 143 NVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 322
NV ++D+ G++ K EL+E+V + + P F + G + RGVL GPPG GKT+LA+A+A
Sbjct: 263 NVRFSDVQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVA 321
Query: 323 NECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXXXXXXXX 502
E F + G + M+ G VR++F AR +P ++F DELD+I +
Sbjct: 322 GEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQ---KRNAR 378
Query: 503 XXXXXXXVINQILTEMDGMGRQEKTSSS---SGATNRPDIIDPAILRPGRLDQ 652
+NQ+L ++DG + E + GATN P+ +DPA+ RPGR D+
Sbjct: 379 DAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDR 431
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 113 bits (271), Expect = 3e-26
Identities = 56/121 (46%), Positives = 75/121 (61%)
Frame = +2
Query: 110 SALRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPG 289
S LRE VV V W DI GLE K L+E V YP PD F +P+RG+L +GPPG
Sbjct: 444 SILREIVVSGDEVHWDDISGLEFAKHSLKEAVVYPFLRPDLFQGL-REPARGMLLFGPPG 502
Query: 290 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDS 469
GKT+LA+A+A E ++ F S+ L + + GESE VR +F A+ SP ++F DE+DS
Sbjct: 503 TGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDS 562
Query: 470 I 472
+
Sbjct: 563 L 563
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 106 bits (255), Expect = 2e-24
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Frame = +2
Query: 143 NVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFG--MQPSRGVLFYGPPGCGKTLLAKA 316
+V++ DIGG++ +L + V +P+++P+ F G + +G+L YGPPGCGKT+LAKA
Sbjct: 85 DVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKA 144
Query: 317 IANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSIAKXXXXXX 496
+A + QA FI+V L WFGES V +F AR P ++F DE+D+ +
Sbjct: 145 LAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLR---QRQ 201
Query: 497 XXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNRPDIIDPAILR 634
+ + ++ DG+ + GATNRP ID AI R
Sbjct: 202 RTDHEAMAQIKAEFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR 247
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 99 bits (238), Expect = 3e-22
Identities = 48/119 (40%), Positives = 72/119 (60%)
Frame = +2
Query: 116 LRETVVEVPNVTWTDIGGLEGVKRELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCG 295
+ E + V W+DI GL+ K L+E V YP P+ F +P +G+L +GPPG G
Sbjct: 366 MNEIISNHEPVYWSDIAGLDDAKNSLKEAVIYPFLRPELFQGL-REPVQGMLLFGPPGTG 424
Query: 296 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDELDSI 472
KT+LA+A+A E +A F S+ L + + G+SE VR +F+ A+ + V+F DE+DSI
Sbjct: 425 KTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSI 483
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 97.5 bits (232), Expect = 1e-21
Identities = 59/151 (39%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Frame = +2
Query: 224 PDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS-VKGPELLTMWFGESEAN 400
P K G+ +G+L YGPPG GKTL+A+ I A V GPE+L + G+SE N
Sbjct: 293 PGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEEN 352
Query: 401 VRDIF--------DKARSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDG 556
VR +F D+ + ++ FDELD+I K V+NQ+L +MDG
Sbjct: 353 VRKLFADAEREYRDRGEESGLHIIIFDELDAICK-KRGSSGGDTGVGDQVVNQLLAKMDG 411
Query: 557 MGRQEKTSSSSGATNRPDIIDPAILRPGRLD 649
+ Q G TNR D+ID A+LRPGRL+
Sbjct: 412 VD-QLNNILVIGMTNRKDMIDEALLRPGRLE 441
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 45.6 bits (103), Expect = 6e-06
Identities = 35/135 (25%), Positives = 58/135 (42%)
Frame = +2
Query: 245 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKA 424
G+ RG L YGPPG GKT A+A E + + E G ++ + +
Sbjct: 238 GIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEK-----GLTDDRLNHLLSNV 292
Query: 425 RSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGRQEKTSSSSGATNR 604
V+ +++DS A + +L +DG+ ++ TN
Sbjct: 293 --PPKAVVLLEDVDS-AFQGRERSGEVGFHANVTFSGLLNALDGVTSSDERIIFM-TTNH 348
Query: 605 PDIIDPAILRPGRLD 649
P+ +DPA++RPGR+D
Sbjct: 349 PEKLDPALVRPGRVD 363
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 33.5 bits (73), Expect = 0.027
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 230 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC--QANFISVKGPELLTMWFGESEA 397
K KFG +GVLF G G GKT LA AIA E + F + G E+ + ++EA
Sbjct: 58 KSKKFG---GKGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEA 112
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 33.5 bits (73), Expect = 0.027
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 251 QPSRGVLFYGPPGCGKTLLAKAIAN 325
QP LF GP G GKTLL KA+A+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALAS 636
Score = 25.8 bits (54), Expect = 5.5
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Frame = +2
Query: 278 GPPGCGKTLLAKAIA-----NECQANFISVK------GPELLTMWF-GESEANVRDIFDK 421
G PG GKT +A+ +A ++ AN + K G + F GE E ++ + +
Sbjct: 209 GEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSVLKE 268
Query: 422 A-RSASPCVLFFDEL 463
S +P +LF DE+
Sbjct: 269 VEESETPIILFVDEM 283
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 33.5 bits (73), Expect = 0.027
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +2
Query: 158 DIGGLEGVKRELQELVQ-YPVEHPDKFLK---FGMQPSRGVLFYGPPGCGKTLLAKAIA 322
DI G +GV ++LQ+ +Q Y F K G+ + VL GPPG GKT A +A
Sbjct: 372 DICGNKGVVQKLQKWLQDYHKNRKSNFNKPGPDGLGLYKAVLLSGPPGIGKTTAAHLVA 430
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 33.5 bits (73), Expect = 0.027
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 230 KFLKFGMQPSRGVLFYGPPGCGKTLL 307
+FL F + +R V+F GPPG GK++L
Sbjct: 2504 EFLNFSLTKNRCVIFCGPPGSGKSML 2529
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 33.1 bits (72), Expect = 0.036
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 230 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN--FISVKGPELLTMWFGESEA 397
K ++ G R +L GPP GKT +A +A ++ F+++ E+ ++ ++EA
Sbjct: 56 KMIQEGRIAGRAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEA 113
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 31.1 bits (67), Expect = 0.15
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Frame = +2
Query: 245 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANF--ISVKG----PEL---LTMWFGESEA 397
G + + GPPG GKT + K+IA+ F SV G E+ + G
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPG 626
Query: 398 NVRDIFDKARSASPCVLFFDELDSIAK 478
+ K ++ +P +L DE+D + K
Sbjct: 627 KIVQALKKVQTENPLIL-IDEIDKVGK 652
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.9 bits (64), Expect = 0.34
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = +2
Query: 77 NFRYAMTKSSPSALRETVVEVPN--VTWTDIGG-LEGVKRELQEL-VQYPVEHPDKF--L 238
N + K S L E +++ + + D GG + + Q++ YP P F L
Sbjct: 555 NKKLEKDKQSGKVLDEEIIQEKQLVIRFEDCGGGIPSPAIKFQDVSFNYP-GGPTIFSKL 613
Query: 239 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 352
FG+ V GP G GKT L K I + Q + SV
Sbjct: 614 NFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSV 651
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 29.9 bits (64), Expect = 0.34
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 251 QPSRGVLFYGPPGCGKTLLAKAIA 322
+P LF GP G GKT L KA+A
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALA 553
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 29.9 bits (64), Expect = 0.34
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 227 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 328
+KF+ P +LFYGPPG GKT A A +
Sbjct: 48 EKFISSNRVPH--MLFYGPPGTGKTSTILACARK 79
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 257 SRGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 361
SR +L GP GCGK+ + +A E + I P
Sbjct: 105 SRLLLICGPSGCGKSTAVQVLAKELGYSLIEWLNP 139
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -1
Query: 525 TRSAAPPASDTEPPRDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNHMVSSSGPFTD 346
T ++ +S + + SSSS +++ + + S S + +S S + SSS P T
Sbjct: 153 TSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITS 212
Query: 345 IKLA*HSLAMAFAS 304
+ HS + + +S
Sbjct: 213 STSSSHSSSSSSSS 226
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -1
Query: 519 SAAPPASDTEPPRDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNHMVSSS 361
S++P +S T + SSSS +++ + + S S + +S S + SSS
Sbjct: 141 SSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 193
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 27.5 bits (58), Expect = 1.8
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -1
Query: 519 SAAPPASDTEPPRDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNHMVSSSGPFTDIK 340
S PAS PP ++ SS N + ++ R K +R D V G F +
Sbjct: 621 STPTPASVLAPPSSASLSSSKDANRSVPESPRR-EKKNRVTLDDFTFLAVLGKGNFGKVM 679
Query: 339 LA*HSLAMAF-ASKVL 295
LA + + F A KVL
Sbjct: 680 LAEYKVNKKFYAIKVL 695
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 266 VLFYGPPGCGKTLLAKAIANE 328
+LFYG PG GKT A++ E
Sbjct: 55 MLFYGSPGTGKTSTILALSRE 75
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Frame = -1
Query: 651 WSRRPGRRM----AGSMMSGLFVAPDDEDVFSWRPMPSISVRIWL-----MTRSAAPPAS 499
W+ G R+ AGS ++ L +P +++ S P ++ IW +T+ PA
Sbjct: 376 WNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH 435
Query: 498 DT 493
DT
Sbjct: 436 DT 437
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 248 MQPSRGVLFYGPPGCGKTLLAKAIANE 328
+Q + +L G PG GKT L A+A E
Sbjct: 1556 LQVLKPILLEGSPGVGKTSLITALARE 1582
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = -1
Query: 534 WLMTRSAAPPASDTEPPRDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNHMVSSS 361
+ +T S++ P+S + + SSSSK+++ + + S S++ +S S + SSS
Sbjct: 145 YFITSSSSTPSSSSSSSSS-SPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSS 201
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 549 ISVRIWLMTRSAAPPASDTEPPRDLAMESSSSKNNT--HGDADRALSKMSRTFASDSPNH 376
+S + ++ S P D P L SSSS +NT G + +LS S + SD+ +
Sbjct: 9 LSCSLRQLSISPTAPPGDVGTPGSLLSLSSSSSSNTDSSGSSLGSLSLNSNSSGSDNDSK 68
Query: 375 MVSSS 361
+ S S
Sbjct: 69 VSSPS 73
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Frame = +2
Query: 164 GGLEGVKRELQELV-------QYPVEHPDKF--LKFGMQPSRGVLFYGPPGCGKTLLAKA 316
G LEGVK + + ++ QYP + + F + S + GP G GK+ L K
Sbjct: 660 GFLEGVKTKQRAIIKVQHMSFQYPGTSKPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKV 719
Query: 317 IANE 328
+ E
Sbjct: 720 LTGE 723
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 251 QPSRGV-LFYGPPGCGKTLLAKAIANECQANFI 346
QP + V + GP G GKT +AKA++ + +I
Sbjct: 11 QPYKYVFVVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 230 KFLKFGMQPSRGVLFYGPPGCGKT 301
K +KF + L +GPPG GKT
Sbjct: 216 KAVKFSIAVKELSLIHGPPGTGKT 239
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 260 RGVLFYGPPGCGKTLL 307
+G+ YG GCGKT L
Sbjct: 119 KGIYLYGDVGCGKTAL 134
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -1
Query: 516 AAPPASDTEPPRDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNH 376
AAP +S + + S + A + S SRT A P+H
Sbjct: 269 AAPSSSTESDEESIPLSYQSKRRRVSARASSSASSSSRTQAKSIPSH 315
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 362 LVPSLI*S*PDTRWRWPL 309
++ SL+ DT WRWPL
Sbjct: 199 IISSLVTEHSDTAWRWPL 216
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = -1
Query: 612 MSGLFVAPDDEDVFSWRPMPSISVRIWLMTRSAAPPASDTEPPRDLAMESSSSKNNTHGD 433
M G D+ ++ +P + + S + E R+L+ SSS+ + D
Sbjct: 662 MVGYLEDMDEGEMLDANNLPEMQFALEQELESNSSDDDVVEVHRELSHNSSSNDEDDGND 721
Query: 432 ADRALSKMSRTFASDSPN 379
D +MSR + +S N
Sbjct: 722 EDPLSREMSRRLSFESAN 739
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -1
Query: 561 PMPSISVR-IWLMTRSAAPPASDTEPPRDLAMESSSSKNNTHGDADRALSKMSRTFASDS 385
PMPS +V + PPA+ ++PPR S+ S + A S S + SD+
Sbjct: 257 PMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNASTRSTGTSSSMAHSYDSPPSPSSPSDA 316
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -1
Query: 552 SISVRIWLMTRSAAPPASDTEPPRDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNHM 373
+IS I+ T +++ +S P SSSS +++ + S +S + +S +
Sbjct: 128 TISGGIYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSS 187
Query: 372 VSSSG 358
SSSG
Sbjct: 188 ASSSG 192
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 266 VLFYGPPGCGKTLLAKAIANECQANFIS-VKGP 361
V GPPG GK+ L K++ IS + GP
Sbjct: 77 VAVMGPPGTGKSTLIKSLVRRYSKYTISQITGP 109
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 266 VLFYGPPGCGKTLLAKAIANECQANFISV 352
++ G PG GKT LA+ +A + I +
Sbjct: 11 IIICGTPGTGKTTLAEQVAETTELENICI 39
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 209 YPVEHPDKFLKFGMQPSRG-VLFYGPPGCGKT 301
Y V P + + + G L GPPG GKT
Sbjct: 1269 YGVNEPQAYAIYASSVNDGFTLIQGPPGTGKT 1300
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 519 SAAPPASDTEPPRDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNHMVSSSGP 355
S+A P++ + + SSSS ++ + + SRT + + +H SS P
Sbjct: 137 SSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTSHKSSSYRP 191
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 25.0 bits (52), Expect = 9.6
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Frame = -1
Query: 591 PDDEDVFSWRPMP-SISVRIWLMTRSAAPPASDTEPPRDLAMESSSSKNNTHGDADRALS 415
P DE + P P S S R ++ + T R ES S +++ D+D S
Sbjct: 51 PKDESI---SPTPISYSFRSLRRGHTSGHASEHTSSSRSSHDESDSMSSSSESDSDSVSS 107
Query: 414 KMSRTFASDSPNHMVSSSGPFTDIKL 337
+ + SDS SS I L
Sbjct: 108 ESNPKSYSDSSTSSARSSSTSGSISL 133
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -1
Query: 435 DADRALSKMS---RTFASDSPNHMVSSSGPFT 349
D++++ S S RTFASD+ NH S GP T
Sbjct: 131 DSEKSTSNHSTPERTFASDAKNH--SPKGPTT 160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,575,535
Number of Sequences: 5004
Number of extensions: 51224
Number of successful extensions: 365
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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