Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5495
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0561 - 15476484-15476649,15476814-15476893,15476971-154770... 153 2e-37
12_02_0966 - 24906361-24906958,24907084-24907250,24907403-249076... 60 1e-09
06_01_0079 - 633595-633985,634346-634543,634864-635036,635355-63... 56 3e-08
10_01_0089 + 1103841-1104152,1104809-1104946,1105527-1105631,110... 54 1e-07
11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228,530... 52 4e-07
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 45 6e-05
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 45 6e-05
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 45 6e-05
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 43 2e-04
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 43 2e-04
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 42 3e-04
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 40 0.002
05_03_0589 - 15872006-15872126,15872389-15872438,15872767-158728... 39 0.004
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 38 0.006
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 38 0.010
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 35 0.052
02_05_0639 - 30552148-30552265,30552362-30552523,30553177-305532... 35 0.069
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 33 0.16
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 32 0.48
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 31 0.64
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 31 0.84
12_01_0519 - 4102251-4102352,4102522-4103439,4104763-4104837 29 3.4
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 29 4.5
12_02_0356 + 17915029-17916236,17932970-17933283,17933936-179342... 28 6.0
11_01_0307 + 2304500-2306023 28 6.0
03_05_0865 - 28365430-28367640 28 7.9
01_01_0897 + 7070539-7071522,7071949-7072620 28 7.9
>05_03_0561 -
15476484-15476649,15476814-15476893,15476971-15477030,
15477117-15477210,15477287-15477421,15477601-15477656,
15478359-15478460,15478544-15478651,15479206-15479283,
15479432-15479521,15480061-15480123
Length = 343
Score = 153 bits (370), Expect = 2e-37
Identities = 76/201 (37%), Positives = 123/201 (61%), Gaps = 13/201 (6%)
Frame = +1
Query: 46 QMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNR-------DRESDG 204
++K++ ++GF + + Y V+++N Q++ + L + + D + G
Sbjct: 21 KIKLLFQTGFDEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVISPDNQEIG 80
Query: 205 KMVFDVIQRMEDTEPFSEELLAAMKRLWADSGVQECFGRSNEYQLNDSAKYFLDDLDRLG 384
+ + D+ R+ D ++EL+ +KRLW D +QE + R + QL D A+YF+++LDRL
Sbjct: 81 EKLSDIDGRL-DYPLLNKELVLDVKRLWQDPAIQETYLRGSILQLPDCAQYFMENLDRLA 139
Query: 385 AKDYQPTEQDILRTRVKTTGIVEVHFSFKNLN------FKLFDVGGQRSERKKWIHCFED 546
Y PT++D+L RV+T G+V++ FS N ++L+DVGGQR+ER+KWIH FE
Sbjct: 140 EAGYVPTKEDVLYARVRTNGVVQIQFSPVGENKRGGEVYRLYDVGGQRNERRKWIHLFEG 199
Query: 547 VTAIIFCVAMSEYDQVLHEDE 609
V A+IFC A+SEYDQ+L EDE
Sbjct: 200 VNAVIFCAAISEYDQMLFEDE 220
>12_02_0966 - 24906361-24906958,24907084-24907250,24907403-24907650,
24907824-24908001,24908196-24908372,24908459-24908563,
24908633-24908770,24909757-24910836
Length = 896
Score = 60.5 bits (140), Expect = 1e-09
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 22/152 (14%)
Frame = +1
Query: 223 IQRMEDTEPF-SEELLAAMKRLWADSGVQECFGRSNEYQ-LNDSAKYFLDDLDRLGAKDY 396
I +ED P S E ++ LW D +Q + R +E L +A YFLD + +Y
Sbjct: 592 IGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELPFLPSAASYFLDKAVDISRTEY 651
Query: 397 QPTEQDILRTR--VKTTGIVEVHFSFKN-----------------LNFKLFDVGGQ-RSE 516
+ ++ DIL + G+ FSF L ++L + + E
Sbjct: 652 ELSDMDILYADGITSSDGLASTDFSFPQLALDGRGFDEPDPQDTLLRYQLIRINNKGLHE 711
Query: 517 RKKWIHCFEDVTAIIFCVAMSEYDQVLHEDEN 612
KW+ F+DV +IFCVA+S+YD+ +ED N
Sbjct: 712 NCKWLQMFDDVRLVIFCVAVSDYDE-YYEDAN 742
>06_01_0079 -
633595-633985,634346-634543,634864-635036,635355-635599,
635683-635860,636291-636473,636769-636873,637709-637846,
637933-638925
Length = 867
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Frame = +1
Query: 253 SEELLAAMKRLWADSGVQECFGRSNEYQ-LNDSAKYFLDDLDRLGAKDYQPTEQDILRTR 429
+ E ++ +W D +Q + R +E L D A+YFL + + +Y+P+E+DI+
Sbjct: 575 TREYAPIVEEMWKDPAIQATYKRKDELHFLPDVAEYFLSRAIEVSSNEYEPSEKDIIYAE 634
Query: 430 VKT--TGIVEVHFSF------------------KNLN-FKLFDVGGQ-RSERKKWIHCFE 543
T G+ + F+ + LN ++L V + +E KW+ FE
Sbjct: 635 GVTQGNGLAFIEFTLDDRSPMSEMYTDNHEPHSQTLNKYQLIRVSAKGMNEGCKWVEMFE 694
Query: 544 DVTAIIFCVAMSEYDQV 594
DV+ +IF VA+S+YDQ+
Sbjct: 695 DVSMVIFSVALSDYDQL 711
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 1 LLLGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAIL 147
L+LG+ +G STI KQ K+++++ FT E+ + ++ SN + L +L
Sbjct: 458 LILGSPGAGTSTIFKQAKLLYDTRFTQEELDSIKLMIQSNMFKYLGILL 506
>10_01_0089 +
1103841-1104152,1104809-1104946,1105527-1105631,
1106403-1106577,1107124-1107398,1108222-1108391,
1108508-1109084
Length = 583
Score = 53.6 bits (123), Expect = 1e-07
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Frame = +1
Query: 253 SEELLAAMKRLWADSGVQECFGRSNEYQ-LNDSAKYFLDDLDRLGAKDYQPTEQDILRTR 429
+ E ++ +W D +Q + R NE L D A YFLD + + + +Y+PTE DIL
Sbjct: 296 TREYAPIVEEVWKDPAIQATYKRKNELHFLPDVASYFLDRVVEISSNEYEPTETDILYAE 355
Query: 430 --VKTTGIVEVHFSFKN---LNFKLFDVGGQRSERKKW----------------IHCFED 546
+ G+ + FS + L+ D G + + K+ + ED
Sbjct: 356 GVNQWNGLSTLEFSLDDRGPLSDSYADKAGNPAIQTKYQLIRMNSKGLTGGFKCLGMLED 415
Query: 547 VTAIIFCVAMSEYDQ 591
+ AIIFC+++++YDQ
Sbjct: 416 IRAIIFCISLADYDQ 430
>11_01_0656 -
5301048-5301441,5301779-5301976,5302056-5302228,
5302691-5302935,5303014-5303191,5303578-5303760,
5303858-5303962,5304621-5304758,5304846-5305802
Length = 856
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 23/137 (16%)
Frame = +1
Query: 253 SEELLAAMKRLWADSGVQECFGRSNEYQ-LNDSAKYFLDDLDRLGAKDYQPTEQDILRTR 429
+ E + +W D +Q + R +E L D A+YFL + + +Y+P+E+D++
Sbjct: 563 TREYAPFVDEMWKDPAIQATYKRKDELHFLPDVAEYFLSRAIEVSSNEYEPSEKDVIFAE 622
Query: 430 VKT--TGIVEVHFSFKNLN-------------------FKLFDVGGQ-RSERKKWIHCFE 543
T G+ + F+ + + ++L V + ++ KW+ FE
Sbjct: 623 GVTQGNGLAFIEFALDDRSPMSEPYIENPEAHSQPLTKYQLIRVSAKGMNDGCKWVEMFE 682
Query: 544 DVTAIIFCVAMSEYDQV 594
DV +IF VA+S+YDQV
Sbjct: 683 DVRMVIFSVALSDYDQV 699
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +1
Query: 1 LLLGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAIL 147
LLLG +G STI KQ K ++ + FT E+ + + ++ SN + L +L
Sbjct: 446 LLLGPDGAGTSTIFKQAKYLYGTRFTQEELENIKLIIQSNMFKYLGILL 494
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 424 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVL 597
T + T G +KN++F ++DVGGQ R W H F++ +IF V ++ D+V+
Sbjct: 167 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVV 224
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 424 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVL 597
T + T G +KN++F ++DVGGQ R W H F++ +IF V ++ D+V+
Sbjct: 44 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVV 101
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 424 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVL 597
T + T G +KN++F ++DVGGQ R W H F++ +IF V ++ D+V+
Sbjct: 44 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVV 101
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 424 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVL 597
T + T G +KN++F ++DVGGQ R W H F++ +IF V ++ ++V+
Sbjct: 44 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVV 101
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 424 TRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVL 597
T + T G +KN++F ++DVGGQ R W H F++ +IF V ++ ++V+
Sbjct: 44 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVV 101
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +1
Query: 466 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVL 597
+KN++F ++DVGGQ R W H F++ +IF V ++ D+V+
Sbjct: 75 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVV 118
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 412 DILRTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQ 591
++L T V T G +KN+ F ++DVGGQ R W H F + A+I+ V + ++
Sbjct: 41 EVLST-VPTIGFNVEKVQYKNVVFTVWDVGGQEKLRPLWRHYFNNTDALIYVVDSLDRER 99
Query: 592 V 594
+
Sbjct: 100 I 100
>05_03_0589 -
15872006-15872126,15872389-15872438,15872767-15872835,
15873027-15873128,15873874-15873951,15874100-15874189,
15874730-15874822
Length = 200
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 304 QECFGRSNEYQLNDSAKYFLDDLDRLGAKDYQPTE 408
QE + R + QL D A+YF+++LDRL DY PT+
Sbjct: 87 QETYLRGSILQLPDCAQYFMENLDRLAEADYVPTK 121
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 412 DILRTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQ 591
++L T V T G +KN+ F ++DVGGQ R W H F + +I+ V + ++
Sbjct: 41 EVLST-VPTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRER 99
Query: 592 V 594
+
Sbjct: 100 I 100
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 466 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDE 609
+ N+ F+++D+GGQ S R W F + AII+ V S+ D+++ E
Sbjct: 73 YNNIKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVTAKE 120
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 430 VKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV 594
+ T G +KN+ F ++DVGGQ R W F + A+I+ V + +++
Sbjct: 45 IPTIGFNVEKVEYKNVAFTVWDVGGQDKLRPLWRQYFRNADALIYVVDSMDRERI 99
>02_05_0639 -
30552148-30552265,30552362-30552523,30553177-30553298,
30553515-30553596,30554407-30554699
Length = 258
Score = 34.7 bits (76), Expect = 0.069
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 472 NLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV 594
N+ KL+D+GGQR R W V+AI++ V ++ D +
Sbjct: 137 NVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSI 177
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 412 DILRTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQ 591
++L T V T G +KN+ F ++DVGGQ R W + A+I+ V + ++
Sbjct: 41 EVLST-VPTVGFNVEKVQYKNVVFTVWDVGGQEKLRPLWKMYLSNSDALIYVVDSLDRER 99
Query: 592 VL 597
++
Sbjct: 100 II 101
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 463 SFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDENNE 618
S + FK FD+GG + R+ W + V A+++ V YD+ + E
Sbjct: 60 SIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLV--DAYDKERFSESKKE 109
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 463 SFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDENNE 618
S + FK FD+GG + R+ W + V A+++ V YD+ + E
Sbjct: 60 SIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLV--DAYDKERFAESKKE 109
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +1
Query: 415 ILRTRVKTTGIVE--VHFSFKNLNF-----KLFDVGGQRSERKKWIHCFEDVTAIIFCVA 573
+L+ + TG++ + F+ K + + ++D+GGQ++ R W + FE +++ V
Sbjct: 33 VLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIGGQKTIRSYWRNYFEQTDGLVWVVD 92
Query: 574 MSE 582
S+
Sbjct: 93 SSD 95
>12_01_0519 - 4102251-4102352,4102522-4103439,4104763-4104837
Length = 364
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 37 IVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGN 183
++K +K IH+ GFT+E FK + ++ I + R + +L + N
Sbjct: 305 LLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGKSREVRSLTNVVKN 353
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = +1
Query: 349 AKYFLDDLDRLGAKD-YQPTEQDILRTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKK 525
AK LD G + Q+ L T S + FK FD+GG R R+
Sbjct: 22 AKILFLGLDNAGKTTLFYMLSQENLAVHQPTQHPTSEELSIGRIRFKAFDLGGHRIARRV 81
Query: 526 W 528
W
Sbjct: 82 W 82
>12_02_0356 +
17915029-17916236,17932970-17933283,17933936-17934244,
17934613-17935439
Length = 885
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = +1
Query: 187 DRESDGKMVFDVIQRMEDTEPFSEELLAAMKRLWADSG---VQECFGR--SNEYQLNDSA 351
D ESD +++ E+ +SE+ + K L D V F R S + +D
Sbjct: 361 DSESDDVSYHELVSMFEELHAYSEKEIVKFKALKKDHASLEVMSLFRRIASRDDNCSDKQ 420
Query: 352 KYFLDDLDRLGAKDYQPTEQDILR 423
K DD+D L KD ++ + R
Sbjct: 421 KGKYDDIDEL--KDVAQVDKQLER 442
>11_01_0307 + 2304500-2306023
Length = 507
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 156 AQLGHHLWQ*RPRKRW*DGVRRDSTDGG 239
A +GH LWQ R R+R G+ ++ T G
Sbjct: 463 AYVGHRLWQRRRRRRRAGGMEQELTSSG 490
>03_05_0865 - 28365430-28367640
Length = 736
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 133 LVAILRAMPNLGIIYGNRDRESDGKMVFDVIQRMEDTEPFSEELLA 270
+V +L AMP+ + N D E D K ++ T P + E LA
Sbjct: 486 VVGVLDAMPSSNLKPENEDEELDAKTIYRTTYMFSATMPPAVERLA 531
>01_01_0897 + 7070539-7071522,7071949-7072620
Length = 551
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 106 VVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGKMVFDVIQRMEDTEPFSEEL 264
+ YSNT+ + +A G G+R RE + VFD R+ TEP E L
Sbjct: 195 IAYSNTVLTRIAFGDESARGGGGGGDRGREL--RKVFDDFARLLGTEPMGELL 245
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,195,974
Number of Sequences: 37544
Number of extensions: 449345
Number of successful extensions: 1319
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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