Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5495
         (682 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.2  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 326 TSTNSTTPLNISWTTSTG 379
           T+T S  PLNI W+T+ G
Sbjct: 53  TATGSP-PLNIDWSTADG 69


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 326 TSTNSTTPLNISWTTSTG 379
           T+T S  PLNI W+T+ G
Sbjct: 53  TATGSP-PLNIDWSTADG 69


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 628  WHTVRCFHPRATPDH 584
            WH V   +PR  PD+
Sbjct: 1467 WHAVMTTYPRINPDN 1481


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 7   LGAGESGKSTIVKQMKIIHESGFTNE 84
           +G    GKSTIVK +  +    F NE
Sbjct: 48  IGHVAHGKSTIVKAISGVQTVRFKNE 73


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 323 ERPKHS*TPESAQSLFIAARSSSLNGS 243
           E  ++S  P+S   L +++R S +NG+
Sbjct: 232 ESHQNSNVPKSVAGLNVSSRRSDMNGT 258


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 603 LVQHLIIFRHGNTEYDRGHVLEAMNPFL 520
           L Q  +IFRHG+   D  + +   +P+L
Sbjct: 2   LKQINVIFRHGDRIPDEKNEMYPKDPYL 29


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 603 LVQHLIIFRHGNTEYDRGHVLEAMNPFL 520
           L Q  +IFRHG+   D  + +   +P+L
Sbjct: 17  LKQINVIFRHGDRIPDEKNEMYPKDPYL 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,465
Number of Sequences: 438
Number of extensions: 4611
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)