Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5494
(739 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 28 1.6
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 28 1.6
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 28 1.6
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 27 2.8
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 26 4.9
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 26 4.9
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 26 4.9
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 26 6.4
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 26 6.4
SPBPB2B2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.4
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces... 25 8.5
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 8.5
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 25 8.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 8.5
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.9 bits (59), Expect = 1.6
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +3
Query: 153 SEWRDHRVL-AKQRGFYVPGAIRH-AEGCKVTVELDGYENEPVEYSDVFGMNKLDVIGDA 326
SE ++ R+ AK F+ P + ++GC + +L +E K D++ D
Sbjct: 728 SEEKERRLREAKIAAFFAPNQTKEGSDGCTTSSQLGLFEK------------KGDLVNDE 775
Query: 327 SPQMSHLLMGLPCVVRTSDPNRENVQNVFVEGFILEVLNSPI 452
SHLL +P +R + +N N+ +LNS +
Sbjct: 776 DKLSSHLLDSVPNALRQAPIGLKNTNNLSERNASSNLLNSSL 817
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 479 MDIISFEILLYNNVGCDFIILFVLGFYFTCICNIYYTLVVPQ*SKFRL*LT-EIGSLFTI 655
++++ + L +G D + V+ C NIY+ L+ P +FR +G LF+I
Sbjct: 526 INLLEIFVPLTGRIGTDKVADNVVATVCVCGFNIYFPLMSPWIQRFRSRCCFRLGLLFSI 585
Query: 656 MIL-FSKII 679
++ FS I
Sbjct: 586 FVVGFSSFI 594
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 383 VRGTHDARQTHQQMAHLRAGIADNIQFVHTKHVTVFDRF 267
VRGT + + ++ L G+ D I+FV K V+ + F
Sbjct: 30 VRGTVRSMEKADELIRLNPGLKDKIEFVIVKDVSASNAF 68
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 27 STASVLDFHNYQRPVLQ 77
STA+VL HNY+RP+++
Sbjct: 234 STAAVLSPHNYRRPIVK 250
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 26.2 bits (55), Expect = 4.9
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = -3
Query: 359 QTHQQMAHLRAGIADNIQFVHTKHVT--VFDRFIFITV*LYRHFTTFGVSYRSGYIKAPL 186
Q QM AG F + +T D F +T + T +G+S G I P+
Sbjct: 607 QILDQMGMALAGRVSEEIFFGPEKITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPI 666
Query: 185 LGQNSVVTPFGQINVWVLDEK 123
+ +V PF + ++DE+
Sbjct: 667 DTRETVQKPFSEATAQMIDEE 687
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 3 PNNNTINTSTASVLDFHNYQRPVLQPSPIVRQSPP 107
PN NT + S +D+ + V +P+P+V + P
Sbjct: 379 PNENTPADWSKSYIDYSDPNAEVAKPAPVVAPAAP 413
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 388 LGSEVRTTHGRPISKWLICGLASPITSSLFIPNTSLYSTGSFS 260
L S V+ T ++ +C SP + I ++ LYST SFS
Sbjct: 334 LNSTVKKTFFDNLNSEKVCPSVSPFLTPDNIASSILYSTASFS 376
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 25.8 bits (54), Expect = 6.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 352 ISKWLICGLASPITSSLFIPNTS 284
+SKW++C L+ I ++F+ N +
Sbjct: 528 LSKWIVCALSLSIAVNVFLLNAA 550
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 291 TRHCIRPVHFHNRLTLPSLYNLRRVLS 211
T HCIR +H H R + YN + ++S
Sbjct: 378 TGHCIRIIHAHQRGIACAQYNGKFIVS 404
>SPBPB2B2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 18 INTSTASVLDFHNYQRPVLQPSPIVRQSPPQDVKPFFIQYPNIDLSEWRD 167
+ TA + + H +P+L+PS I S D K F P I+ W D
Sbjct: 3 VQHKTAKIEEDHGLFQPILRPSDI---SKTTDTK-FIQSSPYIEKEHWLD 48
>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 735
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 249 TLPSLYNLRRVLSLRVHKSP 190
T+P L NLRR SL HK P
Sbjct: 59 TIPELKNLRRRGSLDEHKQP 78
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 319 PITSSLFIPNTSLYSTGSFS*PSNSTVTLQPS 224
PIT S ++ NT+L+S+ S S TV++ S
Sbjct: 482 PITPSSYLSNTTLHSSVQSSQSSQFTVSVPSS 513
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 51 HNYQRPVLQPSPIVRQSPPQDVKPFFIQYPNIDLSEWRDH 170
H + R L P+ + P+D K + PN D++ ++ H
Sbjct: 712 HKFIRKRLHQIPVSNKVQPRDQKQPDFKIPNTDINVYKIH 751
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 8.5
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -1
Query: 469 TSTRILIGE-FNTSKMKPSTNTF*TFSRLGSEVRTTHGRPISKWLICGLASPITSSLFIP 293
TST I N+S S+ T + + S PI+ + ++PITSS +
Sbjct: 1136 TSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVV- 1194
Query: 292 NTSLYSTGSFS*PSNSTVT 236
NTS T S S++ +T
Sbjct: 1195 NTSTPITSSTVVNSSTPIT 1213
Score = 25.4 bits (53), Expect = 8.5
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -1
Query: 439 NTSKMKPSTNTF*TFSRLGSEVRTTHGRPISKWLICGLASPITSSLFIPNTSLYSTGSFS 260
NTS S++ + + + S PI+ + ++PITSS + NTS T S
Sbjct: 1327 NTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVV-NTSTPITSSTV 1385
Query: 259 *PSNSTVT 236
S++ +T
Sbjct: 1386 VNSSTPIT 1393
Score = 25.4 bits (53), Expect = 8.5
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -1
Query: 469 TSTRILIGE-FNTSKMKPSTNTF*TFSRLGSEVRTTHGRPISKWLICGLASPITSSLFIP 293
TST I N+S S+ T + + S PI+ + ++PITSS +
Sbjct: 1448 TSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVV- 1506
Query: 292 NTSLYSTGSFS*PSNSTVT 236
NTS T S S++ +T
Sbjct: 1507 NTSTPITSSTVVNSSTPIT 1525
Score = 25.4 bits (53), Expect = 8.5
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -1
Query: 439 NTSKMKPSTNTF*TFSRLGSEVRTTHGRPISKWLICGLASPITSSLFIPNTSLYSTGSFS 260
NTS S++ + + + S PI+ + ++PITSS + NTS T S
Sbjct: 2167 NTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVV-NTSTPITSSTV 2225
Query: 259 *PSNSTVT 236
S++ +T
Sbjct: 2226 VNSSTPIT 2233
Score = 25.4 bits (53), Expect = 8.5
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -1
Query: 469 TSTRILIGE-FNTSKMKPSTNTF*TFSRLGSEVRTTHGRPISKWLICGLASPITSSLFIP 293
TST I NTS S++ + + + S PI+ + ++PITSS +
Sbjct: 2360 TSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVV- 2418
Query: 292 NTSLYSTGSFS*PSNSTVT 236
NTS T S S++ +T
Sbjct: 2419 NTSTSITSSSVLNSSTPIT 2437
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,894,629
Number of Sequences: 5004
Number of extensions: 62551
Number of successful extensions: 240
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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