Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5494
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2770|AAF55749.2|  465|Drosophila melanogaster CG5060-PA...    65   1e-10
BT001349-1|AAN71104.1|  644|Drosophila melanogaster AT24616p pro...    29   5.0  
AY089363-1|AAL90101.1|  490|Drosophila melanogaster AT18617p pro...    29   5.0  
AE014134-627|AAN10374.1|  612|Drosophila melanogaster CG8851-PB,...    29   5.0  
AE014134-626|AAF51093.2|  644|Drosophila melanogaster CG8851-PA,...    29   5.0  

>AE014297-2770|AAF55749.2|  465|Drosophila melanogaster CG5060-PA
           protein.
          Length = 465

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = +3

Query: 144 IDLSEWRDHRVLAKQRGFYVPGAIRHAEGC---KVTVELDGYENEPVEYSDVFGMNKLDV 314
           +DLSEW + RVLAK +  Y PG IRHA+      + VE D  +   + Y+DV    +  V
Sbjct: 26  LDLSEWNNTRVLAKIQNNYAPGIIRHAQEASPDSILVEFDSTDLGLLLYTDVLHQGRNHV 85

Query: 315 IGDASPQMSHLLMGLPCVVRTSDPNRENVQNVFVEGFILEV 437
           I DASP M+ + +     VR     R +   V+VEG I ++
Sbjct: 86  ILDASPPMADITLDARVCVRQRVEGRGSGSFVYVEGIITDI 126


>BT001349-1|AAN71104.1|  644|Drosophila melanogaster AT24616p
           protein.
          Length = 644

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 210 AIRHAEGCKVTVELDGYENEPVEYSDVFGMNKLDVIGDASPQ 335
           A RH +  K ++E D  E EP  + DV+ + K DVI  +  Q
Sbjct: 272 ANRHVKRRKRSLEQDDREREPASFKDVYNVLK-DVINTSQDQ 312


>AY089363-1|AAL90101.1|  490|Drosophila melanogaster AT18617p
           protein.
          Length = 490

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 210 AIRHAEGCKVTVELDGYENEPVEYSDVFGMNKLDVIGDASPQ 335
           A RH +  K ++E D  E EP  + DV+ + K DVI  +  Q
Sbjct: 118 ANRHVKRRKRSLEQDDREREPASFKDVYNVLK-DVINTSQDQ 158


>AE014134-627|AAN10374.1|  612|Drosophila melanogaster CG8851-PB,
           isoform B protein.
          Length = 612

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 210 AIRHAEGCKVTVELDGYENEPVEYSDVFGMNKLDVIGDASPQ 335
           A RH +  K ++E D  E EP  + DV+ + K DVI  +  Q
Sbjct: 272 ANRHVKRRKRSLEQDDREREPASFKDVYNVLK-DVINTSQDQ 312


>AE014134-626|AAF51093.2|  644|Drosophila melanogaster CG8851-PA,
           isoform A protein.
          Length = 644

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 210 AIRHAEGCKVTVELDGYENEPVEYSDVFGMNKLDVIGDASPQ 335
           A RH +  K ++E D  E EP  + DV+ + K DVI  +  Q
Sbjct: 272 ANRHVKRRKRSLEQDDREREPASFKDVYNVLK-DVINTSQDQ 312


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,493,163
Number of Sequences: 53049
Number of extensions: 657339
Number of successful extensions: 1761
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)