Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5488
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U68727-1|AAC51243.1| 435|Homo sapiens homeobox-containing prote... 30 6.5
BC007746-1|AAH07746.1| 436|Homo sapiens PBX/knotted 1 homeobox ... 30 6.5
BC000735-1|AAH00735.1| 336|Homo sapiens PKNOX1 protein protein. 30 6.5
AY566249-1|AAT70235.1| 218|Homo sapiens pkonx1c protein. 30 6.5
AY196965-1|AAO45825.1| 436|Homo sapiens homeobox-containing pro... 30 6.5
AY142115-1|AAN34940.1| 405|Homo sapiens PKNOX1B protein. 30 6.5
AP001748-1|BAA95533.1| 435|Homo sapiens homeobox-containing pro... 30 6.5
AK222892-1|BAD96612.1| 436|Homo sapiens PBX/knotted 1 homeobox ... 30 6.5
Y13613-1|CAA73934.1| 436|Homo sapiens Prep-1 protein. 30 8.6
>U68727-1|AAC51243.1| 435|Homo sapiens homeobox-containing protein
protein.
Length = 435
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 130 ELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGT 182
>BC007746-1|AAH07746.1| 436|Homo sapiens PBX/knotted 1 homeobox 1
protein.
Length = 436
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 131 ELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGT 183
>BC000735-1|AAH00735.1| 336|Homo sapiens PKNOX1 protein protein.
Length = 336
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 131 ELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGT 183
>AY566249-1|AAT70235.1| 218|Homo sapiens pkonx1c protein.
Length = 218
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 131 ELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGT 183
>AY196965-1|AAO45825.1| 436|Homo sapiens homeobox-containing
protein PKNOX1 protein.
Length = 436
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 131 ELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGT 183
>AY142115-1|AAN34940.1| 405|Homo sapiens PKNOX1B protein.
Length = 405
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 131 ELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGT 183
>AP001748-1|BAA95533.1| 435|Homo sapiens homeobox-containing
protein protein.
Length = 435
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 130 ELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGT 182
>AK222892-1|BAD96612.1| 436|Homo sapiens PBX/knotted 1 homeobox 1
isoform 1 variant protein.
Length = 436
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 131 ELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGT 183
>Y13613-1|CAA73934.1| 436|Homo sapiens Prep-1 protein.
Length = 436
Score = 29.9 bits (64), Expect = 8.6
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 475 KLVQCNEKCKDFQCRTMTESQTCTSSKTLFIG-GRAPYGPARVETMNLFISTT 320
+L + NE CKDF R + +T +S+TL G +PY P + + + I+ T
Sbjct: 131 ELEKVNELCKDFCSRYIACLKTEMNSETLLSGEPGSPYSPVQSQQIQSAITGT 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,222,938
Number of Sequences: 237096
Number of extensions: 1717092
Number of successful extensions: 2822
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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