Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5487
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1341 - 32768785-32768847,32770469-32770582,32770809-327708... 51 7e-07
04_01_0425 + 5609819-5610331,5610450-5610664,5612720-5612959,561... 50 2e-06
11_05_0078 - 18906900-18907082,18907104-18907337,18907429-189076... 49 3e-06
04_01_0430 + 5651326-5651820,5651886-5652124,5652265-5652507,565... 45 6e-05
11_01_0441 - 3363069-3363137,3363273-3363430,3363549-3363613,336... 44 1e-04
04_01_0435 + 5693035-5693669,5694999-5695241,5695806-5696007,569... 44 1e-04
04_01_0437 + 5704279-5704788,5705133-5705207 43 2e-04
04_01_0102 + 1060539-1060657,1060752-1060904,1061478-1061728,106... 36 0.037
04_01_0101 + 1041755-1041864,1041950-1042102,1042174-1042424,104... 35 0.065
04_01_0009 - 178579-178638,179151-179246,179504-179565,180181-18... 34 0.085
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 31 0.80
12_01_0151 - 1158834-1159703,1159917-1160092,1160144-1162097,116... 29 3.2
04_04_1320 - 32623378-32623949,32624035-32624451,32624548-326248... 29 3.2
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378... 29 3.2
03_03_0046 + 14040331-14040801,14040915-14041050,14041159-140412... 29 3.2
01_07_0011 - 40435741-40436983,40437432-40437439,40438586-40438624 28 5.6
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 7.4
>04_04_1341 -
32768785-32768847,32770469-32770582,32770809-32770858,
32770940-32771033,32771144-32771221,32771397-32771472,
32771557-32771651,32771748-32771927,32772491-32772802,
32773122-32773670
Length = 536
Score = 51.2 bits (117), Expect = 7e-07
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Frame = +2
Query: 176 SATALAKKIRNKELKSEDLVRAVVERIKEVNPIINAIAADRYEAALTEAREVDRLVAV-G 352
S ++ + + + E + ++ + R++ P + + AA EA E+DR +A G
Sbjct: 49 SILSIRESLLSGERTAAEITAEYLSRLRRTEPSVRSFIHVADAAAEREAEELDRRIATEG 108
Query: 353 LSEQEWQKKPFLGVPFTTKESQAIKGMPLTMGLWSRRKEVASEDSEAIIRLKNAGAIPIG 532
L P GV K++ MP T G + D+ A+ RL+ AGAI +G
Sbjct: 109 LDAVG----PLAGVLVGVKDNLCTANMPSTGGSRILDGYQPAYDATAVRRLREAGAIVVG 164
Query: 533 SSNLPELLVWQETRNLVYGMTKNPHHTGPVSG 628
+NL E + T + +T NP V G
Sbjct: 165 KTNLDEFGMGSTTEGSGFQVTTNPWDDSRVPG 196
>04_01_0425 +
5609819-5610331,5610450-5610664,5612720-5612959,
5613122-5613232,5613789-5613987,5614097-5614453
Length = 544
Score = 49.6 bits (113), Expect = 2e-06
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = +2
Query: 206 NKELKSEDLVRAVVERIKEVNPIINAIAADRYEAALTEAREVDRLVAVGLSEQEWQKKPF 385
N L S LVR ++RI +N +++A+ +A L +A D A G + P
Sbjct: 41 NGSLTSTALVRFYLDRIARLNTLLHAVIEVNPDA-LAQAARADAERATG-----HRCGPL 94
Query: 386 LGVPFTTKESQAIKG-MPLTMGLWSRRKEVASEDSEAIIRLKNAGAIPIGSSNLPE 550
GVP K+ A + + T G S VA D+ + RL+ AGA+ +G +NLPE
Sbjct: 95 HGVPVLLKDIIATRDRLNTTAGSLSLLGAVARRDAGVVARLRRAGAVVLGKANLPE 150
>11_05_0078 -
18906900-18907082,18907104-18907337,18907429-18907653,
18907739-18907909,18907994-18908109,18908215-18908369,
18908450-18908573,18909007-18909107,18909215-18909297,
18909383-18909607,18909694-18909810,18910488-18910640
Length = 628
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/116 (26%), Positives = 54/116 (46%)
Frame = +2
Query: 176 SATALAKKIRNKELKSEDLVRAVVERIKEVNPIINAIAADRYEAALTEAREVDRLVAVGL 355
S L + IR K++ S +L + R+K PII ++ + A +A+E D L+
Sbjct: 165 SIIELGELIRTKQVTSRELTAVFLRRLKRYGPIIESVITITDDLAYKQAKEADDLL---- 220
Query: 356 SEQEWQKKPFLGVPFTTKESQAIKGMPLTMGLWSRRKEVASEDSEAIIRLKNAGAI 523
EQ P G+P+ K+ A+ T G + ++ ++ RLK+ GA+
Sbjct: 221 -EQGKYLGPLHGIPYGLKDIIAVPEYKTTWGSRTFENQILDVEASVYKRLKSTGAV 275
>04_01_0430 +
5651326-5651820,5651886-5652124,5652265-5652507,
5653159-5653360,5653679-5654035
Length = 511
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = +2
Query: 206 NKELKSEDLVRAVVERIKEVNPIINAIAADRYEAALTEAREVDRLVAVGLSEQEWQKKPF 385
N L S LVR ++RI +NP+++A+ + AL +A D A G + P
Sbjct: 37 NGSLTSTTLVRFYLDRIARLNPLLHAVIEVNPD-ALAQAARADAERATGR-----RCGPM 90
Query: 386 LGVPFTTKESQAIKG-MPLTMGLWSRRKEVASEDSEAIIRLKNAGAIPIGSSNLPE 550
GVP K++ A + + T G + + D+ RL+ AGA+ +G ++L E
Sbjct: 91 HGVPVLLKDNMATRDRLNTTAGSLALLGSIVRRDAGVAARLRAAGAVILGKASLSE 146
>11_01_0441 -
3363069-3363137,3363273-3363430,3363549-3363613,
3363709-3363777,3363881-3363973,3364081-3364184,
3364327-3364410,3364486-3364693,3364809-3364880,
3365005-3365080,3365788-3365900,3366006-3366153,
3366996-3367073,3367968-3368097,3368296-3368486,
3368644-3368704,3368847-3368956,3369090-3369312
Length = 683
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 389 GVPFTTKESQAIKGMPLTMGL-WSRRKEVASEDSEAIIRLKNAGAIPIGSSNLPELLVWQ 565
GV K+ P T G W +R +D+ + +L+ GA+ G +N+ EL
Sbjct: 247 GVLVAVKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGAGT 306
Query: 566 ETRNLVYGMTKNPHHTGPVSG 628
N +G T+NP++TG V+G
Sbjct: 307 SGINPHHGSTRNPYNTGKVAG 327
>04_01_0435 +
5693035-5693669,5694999-5695241,5695806-5696007,
5696188-5696583
Length = 491
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +2
Query: 206 NKELKSEDLVRAVVERIKEVNPIINAIAADRYEAALTEAREVDRLVAVGLSEQEWQKKPF 385
N L S LVR +++I +NP+++A+ + AL +A D A G + P
Sbjct: 38 NGSLTSTALVRFYLDQITRLNPLLHAVIEVNPD-ALAQAARADDERATGR-----RCGPL 91
Query: 386 LGVPFTTKESQAIKG-MPLTMGLWSRRKEVASEDSEAIIRLKNAGAIPIGSSNLPELLVW 562
GVP K++ A + + T G ++ V D+ RL+ AGA+ +G ++L E +
Sbjct: 92 HGVPVLLKDNIATRDRLNTTAGSFALLGSVVPRDAGVAARLRAAGAVILGKASLTEWSAY 151
Query: 563 QETRN 577
+ N
Sbjct: 152 RPAPN 156
>04_01_0437 + 5704279-5704788,5705133-5705207
Length = 194
Score = 42.7 bits (96), Expect = 2e-04
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Frame = +2
Query: 173 ESAT--ALAKKIRNKELKSEDLVRAVVERIKEVNPIINAIAADRYEAALTEAREVDRLVA 346
E AT A+ N L S LVR ++R+ +NP+++A+ + AL +A D A
Sbjct: 28 EEATFDAIQLGFSNGSLTSTALVRFYLDRVARLNPLLHAVIEVNPD-ALAQAARADAERA 86
Query: 347 VGLSEQEWQKKPFLGVPFTTKESQAIKG-MPLTMGLWSRRKEVASEDSEAIIRLKNAGAI 523
G P GVP K++ A + + T G + V D+ RL+ AGA+
Sbjct: 87 SG----RRGFGPLHGVPVLLKDNIATRDRLNTTAGSLALLGSVVRCDAGVAARLRAAGAV 142
Query: 524 PIGSSNLPELLVWQETRNLVYG 589
+G SN E W R L G
Sbjct: 143 ILGKSNPAE---WSSFRPLTNG 161
>04_01_0102 +
1060539-1060657,1060752-1060904,1061478-1061728,
1061959-1062141,1062248-1062395,1062679-1062850,
1062971-1063105,1063210-1063356
Length = 435
Score = 35.5 bits (78), Expect = 0.037
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +2
Query: 371 QKKPFLGVPFTTKESQAIKGMPLTMGL--WSRRKEVASEDSEAIIRLKNAGAIPIGSSNL 544
Q+ P G+ F K+ I G G W+R A+ S ++ AGA +G++ +
Sbjct: 26 QQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPVVLAALAAGATSLGTTIM 85
Query: 545 PELLVWQETRNLVYGMTKNPHHTGPVSG 628
E+ N YG NP G V G
Sbjct: 86 DEMAYSINGENTHYGTPTNPCAPGRVPG 113
>04_01_0101 +
1041755-1041864,1041950-1042102,1042174-1042424,
1042878-1043060,1043163-1043310,1043787-1043958,
1057226-1057366,1057478-1057624
Length = 434
Score = 34.7 bits (76), Expect = 0.065
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +2
Query: 371 QKKPFLGVPFTTKESQAIKGMPLTMGL--WSRRKEVASEDSEAIIRLKNAGAIPIGSSNL 544
Q+ P G+ F K+ I G G W+R A+ S ++ AGA +G++ +
Sbjct: 23 QQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPVVLAALAAGATSLGTTIM 82
Query: 545 PELLVWQETRNLVYGMTKNPHHTGPVSG 628
E+ N YG NP G V G
Sbjct: 83 DEMAYSIYGENAHYGTPANPCAPGRVPG 110
>04_01_0009 -
178579-178638,179151-179246,179504-179565,180181-180245,
181271-181363,181489-181592,182070-182153,182223-182303,
182829-182880,183048-183119,183411-183486,183568-183680,
184056-184203,184295-184372,184511-184640,184733-184923,
187039-187099,187201-187371
Length = 578
Score = 34.3 bits (75), Expect = 0.085
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 479 EDSEAIIRLKNAGAIPIGSSNLPELLVWQETRNLVYGMTKNPHHTGPVSG 628
+D+ + RL+ G + IG +N+ EL + N YG +NPH +G
Sbjct: 224 KDAVCVARLRKCGVLFIGKANMHELGLGVTGNNPNYGTARNPHSIDRYTG 273
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 31.1 bits (67), Expect = 0.80
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Frame = +2
Query: 293 DRYEAALTEAREVDRLVAVGLSEQE-----WQKKPFLGVPFTTKESQA-------IKGMP 436
+ Y +++ + + + G +QE + K P+L VPF+ E +A ++G+P
Sbjct: 58 EAYNELVSQGKNFEVVFVSGDKDQEAFDAYFAKMPWLAVPFSDSECRAKLNKRFKVRGIP 117
Query: 437 LTMGLWSRRKEVASEDSEAIIRLKNAGAIPIGSSNLPEL 553
+ L + EV +ED ++ + A P + + EL
Sbjct: 118 HLVILNATSGEVYTEDGVELVTVHGTEAYPFTTERINEL 156
>12_01_0151 -
1158834-1159703,1159917-1160092,1160144-1162097,
1162360-1162620,1162729-1162916,1164127-1164166
Length = 1162
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 122 SERNQSQYLESKHAILKESATALAKKIRNKELKSEDLVRAVVERIKEVNPIINAIAAD 295
++ ++ +Y K+ K K+ NK ++ A+VE+ +VN I+NAI D
Sbjct: 82 TDNDRDKYAVLKYMRTKPKLAMFQLKMANKIKTIKNRFAAIVEQRGDVNTILNAIPID 139
>04_04_1320 -
32623378-32623949,32624035-32624451,32624548-32624895,
32625671-32625768,32625882-32626051,32627134-32627418,
32628041-32628119,32628481-32628623,32629227-32629634
Length = 839
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 455 SRRKEVASEDS-EAIIRLKNAGAIPIGSSNLPELLVWQETRNLVYGMTKN 601
S +E+A E + + I+ LKN GA+P+ + ++ + V N + M N
Sbjct: 459 SSNQELAREAARQGIVLLKNTGALPLSAKSIKSMAVIGPNANASFTMIGN 508
>03_04_0013 +
16436438-16436536,16437257-16437742,16437791-16437826,
16437835-16438323,16438951-16439622
Length = 593
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Frame = +2
Query: 293 DRYEAALTEAREVDRLVAVGLSEQE-----WQKKPFLGVPFTTKESQA-------IKGMP 436
+ Y +++ + + + G S+Q+ + K P+L VPF+ E+ A + G+P
Sbjct: 65 EAYNELVSQGKSFEVVFVSGDSDQDAFNAYFAKMPWLAVPFSDSEALAKLNERYKVMGIP 124
Query: 437 LTMGLWSRRKEVASEDSEAIIRLKNAGAIPIGSSNLPEL 553
+ L ++ E+ +ED ++ A P + + EL
Sbjct: 125 HLVILDAKSGEIYTEDGVELVHEYGTEAYPFTTERINEL 163
>03_03_0046 +
14040331-14040801,14040915-14041050,14041159-14041295,
14041366-14041965
Length = 447
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +2
Query: 215 LKSEDLVRAVVERIKEVNPIINAIAADRYEAALTEAREVDRLVAVGLSEQEWQKKPFLGV 394
+K D R + + + I++ A Y ++ AR V L S Q + V
Sbjct: 329 VKIVDWTRPYLGSSRRLRCIMDPRLAGHY--SVKAARAVAHLAVQCTSPQPRDRPRMAAV 386
Query: 395 PFTTKESQAIKGMPLTMGLWSRRKEVASEDS-EAIIRLKNAGA 520
+ Q K M +T+GLW VA ++ A IR + GA
Sbjct: 387 VDALERLQGFKDMAVTVGLWPTNAPVAGRNAISAKIRAEVRGA 429
>01_07_0011 - 40435741-40436983,40437432-40437439,40438586-40438624
Length = 429
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 317 EAREVDRLVAVGLSEQEWQKKPFLGVPFTTKE 412
+A+ ++RLV L +EWQK P +P + K+
Sbjct: 381 KAKRMNRLVTYNLLNKEWQKVPDCMLPCSRKK 412
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Frame = +2
Query: 389 GVPFTTKESQAIKGMPLTMGL--WSRRKEVASEDSEAIIRLKNAGAIPIGSSNLPELLVW 562
G+ F ++ I+G G W R + A+ + + L+ G +GS+ + EL
Sbjct: 81 GLTFAASDNFEIEGYVAGFGNPDWKRTHKAATRTAVPVTMLQKQGGTYVGSTVMDELGFG 140
Query: 563 QETRNLVYGMTKNPHHT-----GPVSGEALAALKQ 652
NL G NP G SG A+A Q
Sbjct: 141 VSGGNLHNGTPINPASPSLFPGGSCSGSAVAVSAQ 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,881,568
Number of Sequences: 37544
Number of extensions: 373043
Number of successful extensions: 1115
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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