Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5485
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p pro...    29   3.3  
AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p pro...    29   3.3  
AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA...    29   3.3  
X81835-1|CAA57429.1|  868|Drosophila melanogaster serotonin rece...    29   5.8  
BT024439-1|ABC86501.1|  385|Drosophila melanogaster IP01996p pro...    29   5.8  
BT015194-1|AAT94423.1|  638|Drosophila melanogaster RH04788p pro...    29   5.8  
AE014298-1308|AAF46468.3|  385|Drosophila melanogaster CG15371-P...    29   5.8  
AE014297-121|AAF52113.1|  868|Drosophila melanogaster CG1056-PA,...    29   5.8  
AE014297-120|AAN13284.1|  930|Drosophila melanogaster CG1056-PB,...    29   5.8  

>BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p protein.
          Length = 2016

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -3

Query: 220  YQK*LSTE-VWTSLTYFIPTLLDFSCNCHDNTF*IRTNGASHLISIK 83
            Y++ + T+ +WT  +++   LL+ S N  D+T  I   G  + ++IK
Sbjct: 1382 YKRSVDTKFIWTPFSHYDSALLETSLNLDDSTLIIPVEGGRYDVNIK 1428


>AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p
           protein.
          Length = 1332

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -3

Query: 220 YQK*LSTE-VWTSLTYFIPTLLDFSCNCHDNTF*IRTNGASHLISIK 83
           Y++ + T+ +WT  +++   LL+ S N  D+T  I   G  + ++IK
Sbjct: 698 YKRSVDTKFIWTPFSHYDSALLETSLNLDDSTLIIPVEGGRYDVNIK 744


>AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA
            protein.
          Length = 2016

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -3

Query: 220  YQK*LSTE-VWTSLTYFIPTLLDFSCNCHDNTF*IRTNGASHLISIK 83
            Y++ + T+ +WT  +++   LL+ S N  D+T  I   G  + ++IK
Sbjct: 1382 YKRSVDTKFIWTPFSHYDSALLETSLNLDDSTLIIPVEGGRYDVNIK 1428


>X81835-1|CAA57429.1|  868|Drosophila melanogaster serotonin
           receptor 5-HT2 subtype protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 35  SDLKYTEFGYELLLQYLYRN*MTGAICSYLECVVVAITRKIKQRRN 172
           S L Y+  GY+ L  ++      G + + L C+ VA+ RK++   N
Sbjct: 276 SFLDYSPHGYDFLFLFVVFFIFAGGLGNILVCLAVALDRKLQNVTN 321


>BT024439-1|ABC86501.1|  385|Drosophila melanogaster IP01996p
           protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +1

Query: 223 ISCWLISQTIYLIIIYNHFFLLIVKHSLILEMPIFIY 333
           + C+ +  +IY  +I N ++L++     +LE+P FIY
Sbjct: 264 VDCYFMYYSIYNNVINNDYYLIV---PALLEIPAFIY 297


>BT015194-1|AAT94423.1|  638|Drosophila melanogaster RH04788p
           protein.
          Length = 638

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 35  SDLKYTEFGYELLLQYLYRN*MTGAICSYLECVVVAITRKIKQRRN 172
           S L Y+  GY+ L  ++      G + + L C+ VA+ RK++   N
Sbjct: 276 SFLDYSPHGYDFLFLFVVFFIFAGGLGNILVCLAVALDRKLQNVTN 321


>AE014298-1308|AAF46468.3|  385|Drosophila melanogaster CG15371-PA
           protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +1

Query: 223 ISCWLISQTIYLIIIYNHFFLLIVKHSLILEMPIFIY 333
           + C+ +  +IY  +I N ++L++     +LE+P FIY
Sbjct: 264 VDCYFMYYSIYNNVINNDYYLIV---PALLEIPAFIY 297


>AE014297-121|AAF52113.1|  868|Drosophila melanogaster CG1056-PA,
           isoform A protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 35  SDLKYTEFGYELLLQYLYRN*MTGAICSYLECVVVAITRKIKQRRN 172
           S L Y+  GY+ L  ++      G + + L C+ VA+ RK++   N
Sbjct: 276 SFLDYSPHGYDFLFLFVVFFIFAGGLGNILVCLAVALDRKLQNVTN 321


>AE014297-120|AAN13284.1|  930|Drosophila melanogaster CG1056-PB,
           isoform B protein.
          Length = 930

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 35  SDLKYTEFGYELLLQYLYRN*MTGAICSYLECVVVAITRKIKQRRN 172
           S L Y+  GY+ L  ++      G + + L C+ VA+ RK++   N
Sbjct: 276 SFLDYSPHGYDFLFLFVVFFIFAGGLGNILVCLAVALDRKLQNVTN 321


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,065,620
Number of Sequences: 53049
Number of extensions: 370423
Number of successful extensions: 605
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)