Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5480
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 2.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.7
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 23 3.7
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 8.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 8.5
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR SP+ + PL P++ P H
Sbjct: 154 PST-PFPRFISPNAYRFRPPLNPRFGPTH 181
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST + PR P+ + PL P++ P H
Sbjct: 380 PST-SFPRFIPPNAYRFRPPLNPRFGPMH 407
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = -1
Query: 531 GIGCVRGGVSNRGCMCGISCEWCSMRSVSCNRCG 430
G +R G ++ CG SC C + CG
Sbjct: 24 GYPSIRQGTTSYCLGCGDSCHKCKYGIAMSSACG 57
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 149 PST-PFPRFIPPNAYRFRPPLNPRFEPTH 176
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 155 PST-PFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 155 PST-PFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 155 PST-PFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 155 PST-PFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 155 PST-PFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 155 PST-PFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 152 PST-PFPRFIPPNAYRFRPPLNPRFEPTH 179
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 152 PST-PFPRFIPPNAYRFRPPLNPRFEPTH 179
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 152 PST-PFPRFIPPNAYRFRPPLNPRFEPTH 179
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 152 PST-PFPRFIPPNAYRFRPPLNPRFEPTH 179
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 269 PSTRATPRLPSPSQHPSLRPLRPQYLPFH 355
PST PR P+ + PL P++ P H
Sbjct: 158 PST-PFPRFIPPNAYKFRPPLNPRFGPTH 185
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,049
Number of Sequences: 438
Number of extensions: 1815
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -