Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5476
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 38 0.005
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 38 0.009
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 38 0.009
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 38 0.009
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 33 0.27
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 31 0.81
U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 31 1.1
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 30 1.9
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 30 1.9
AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode asta... 30 1.9
Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical p... 29 4.3
Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 4.3
AF003133-1|AAB54137.2| 207|Caenorhabditis elegans Hypothetical ... 29 4.3
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 28 5.7
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 28 7.6
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 28 7.6
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Frame = +1
Query: 127 PEEYG-VQAYAHPEQCDQFF-LCTNGTLTVETCENGLLFDGKGAVHNHCNYNWAVD-CGH 297
P+ G V Y +C F CTNG V C +GL+F K + C+Y W VD C
Sbjct: 236 PQNCGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQM---CDYEWNVDECDL 292
Query: 298 RTANL------EPLSTPGCEYQFGIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSH 459
++ TP G+Y + +C+ + C G F C P LV++E S
Sbjct: 293 ESSGFMENYKASEALTPCTNMDNGLY--ALDCTPRVLSCQNGRENIFECPPSLVFNENSL 350
Query: 460 SCNWPDLLQPFCNPEAVV 513
C++P+ C +A++
Sbjct: 351 ICDYPETSLKCCMEDALL 368
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 349 GIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWPDLL 483
G+Y S CS+SYI C G P C+ L+YD + C+W ++
Sbjct: 125 GVY-SSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMI 168
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/99 (23%), Positives = 42/99 (42%)
Frame = +1
Query: 178 FFLCTNGTLTVETCENGLLFDGKGAVHNHCNYNWAVDCGHRTANLEPLSTPGCEYQFGIY 357
+ +C +G+ +C L++D + C++ +D +S CE I
Sbjct: 136 YIICNSGSPRFLSCSTPLIYD---PTNKKCSWKGMID------ECSQVSGEYCESDGNI- 185
Query: 358 PDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWP 474
ECS + C+ G+ + C LV++ SC+WP
Sbjct: 186 -SKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWP 223
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 349 GIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
G+YP C ++ C G C LVY + C+W
Sbjct: 31 GMYPLG-ACEPRFLACVSGEARYMDCPEDLVYHKNLEFCDW 70
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 38.3 bits (85), Expect = 0.005
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Frame = +1
Query: 31 NKPVNMSAKFLYLAACVAF-ANA-GILLEHAPPCPEEYGVQAYAHPEQCDQFFL-CTNGT 201
N + M ++ AA + A+A +L PPCP+ G+ A C +L C N
Sbjct: 10 NSNLQMRQLSIFAAAVILISADAKNVLNPKGPPCPDGDGLYAVG----CSSKYLQCVNNV 65
Query: 202 LTVETCENGLLFDGKGAVHNHCNYNWAVDCGHR-TANLEPLSTP-GCEYQF-GIYP-DSH 369
++C GL FD A + N G R T N+ + C + G Y D
Sbjct: 66 EYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTLNVRQKAVSINCVGRLSGDYALDKT 125
Query: 370 ECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
C+ +Y +CA G+ C VY C++
Sbjct: 126 VCNENYYQCANGISYMRKCPYQQVYVPILKRCDY 159
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +1
Query: 301 TANLEPLSTPGCEYQFGIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWPDL 480
T P C+ + GI+ EC S++ C GV C LV+D R +C + +
Sbjct: 342 TVRYNPAVHGDCKNRDGIF-GIKECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAI 400
Query: 481 LQPFCNPEAV 510
PE V
Sbjct: 401 CLEPRKPEDV 410
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 178 FFLCTNGTLTVETCENGLLFDGKGAVHNHCNYNWAV-DCGHRTANLEPLSTPGCEYQFGI 354
F++C NG + TC L+F+ C+Y+ V DC +P +TP Y
Sbjct: 591 FYICANGQVVATTCPANLIFN---PYVGECDYSTNVRDC----QGYQPTTTPSYSYPKTT 643
Query: 355 YPDSHECSTSYIKCAYGVPEQFPCTPG 435
+ ST+ Y E P TPG
Sbjct: 644 SKPYEQPSTTQ---GYAPIEYTPVTPG 667
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 349 GIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSC 465
GIY + CS Y++C G C PGL Y+E++ C
Sbjct: 895 GIYALPY-CSQDYVQCMQGRSLISSCAPGLFYNEKNGMC 932
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 37.5 bits (83), Expect = 0.009
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +1
Query: 175 QFFLCTNGTLTVETCENGLLFDGKGAVHNHCNYNWAVDCGHRTANLEPLSTPGCEY---- 342
++ +C NG TC + +F V + VD N E TP E+
Sbjct: 47 EYSICVNGVRQAATCSDDSVFYEDECVPVDESPECRVD-----ENTEEDDTPYAEFDCTS 101
Query: 343 -QFGIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSC 465
Q GIY S CS +I C G C LV++ER+ C
Sbjct: 102 KQDGIY--SIGCSNQFISCVAGGAYMAKCPDSLVFNERTQDC 141
Score = 37.1 bits (82), Expect = 0.012
Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 31/190 (16%)
Frame = +1
Query: 1 KNDAQTSRRT--NKPVNMSAKFLYLAACVAFANAGILLEHAPPCPEEYGVQAYA-HPEQC 171
+ND T++ T ++P A Y + +++ + A P + + A C
Sbjct: 645 ENDGVTTQSTWNDQPSTTQAPNSYESYTTQYSSNDVPSTSAAPIGDRCSLDASGLFSLGC 704
Query: 172 DQFFL-CTNGTLTVETCENGLLFDGKGAVHNHCNYNWAV-DCGHRTANLEP-LSTPGCEY 342
Q ++ C+NG V C L F+ C Y V +CG + + P ++TPG +
Sbjct: 705 SQKYIQCSNGAAIVRRCGESLYFN---EATQECTYRDEVPECGSQGSTSSPVITTPGQDQ 761
Query: 343 QFGIY-------PDSHE------------------CSTSYIKCAYGVPEQFPCTPGLVYD 447
Y P + + CS YI+C+ C L +D
Sbjct: 762 SSNYYGIPSDDVPSTTQTPVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLYFD 821
Query: 448 ERSHSCNWPD 477
ERS SC + D
Sbjct: 822 ERSQSCRFRD 831
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +1
Query: 373 CSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWPDLLQPFCNPEAVVGFKCPSKVPANTP 552
CS YI+C+ G C L ++E + C + D + P C + + P
Sbjct: 704 CSQKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEV-PECGSQGSTSSPVIT-TPGQDQ 761
Query: 553 SAKFWPFP 576
S+ ++ P
Sbjct: 762 SSNYYGIP 769
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 373 CSTSYIKCAYGVPEQFPCTPGLVYDERSHSC 465
CS+ Y++C+YG + C+ V+ C
Sbjct: 1122 CSSKYLRCSYGASKLQQCSEDRVFSNDKLEC 1152
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 328 PGCEYQF-GIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWP 474
P CE + GI+P+ CST+++ C+ G+ C LV++ C+WP
Sbjct: 245 PTCEGKADGIHPNG-VCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 31.9 bits (69), Expect = 0.47
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +1
Query: 157 HPEQ-CDQFFL-CTNGTLTVETCENGLLFDGKGAVHNHCNYNWAVDCGHRTANLEPLSTP 330
HP C FL C+ G + C L+F+ V C+ W D A L P P
Sbjct: 255 HPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILV---CD--WPRDVAE-CAGL-PTPQP 307
Query: 331 GCEYQFGIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
CE + G Y +CS+S+ C G C GL + E + C++
Sbjct: 308 TCE-EDG-YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 370 ECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
EC ++ C+ G+ C L+Y+E C+W
Sbjct: 36 ECEPQFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +1
Query: 334 CE-YQFGIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWPDLLQ 486
CE + G Y S C+T Y C C L YD S C W L++
Sbjct: 138 CENLEDGAY-SSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 373 CSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWP 474
CS + C G + F C LV++++S C++P
Sbjct: 415 CSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 328 PGCEYQF-GIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWP 474
P CE + GI+P+ CST+++ C+ G+ C LV++ C+WP
Sbjct: 245 PTCEGKADGIHPNG-VCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 31.9 bits (69), Expect = 0.47
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +1
Query: 157 HPEQ-CDQFFL-CTNGTLTVETCENGLLFDGKGAVHNHCNYNWAVDCGHRTANLEPLSTP 330
HP C FL C+ G + C L+F+ V C+ W D A L P P
Sbjct: 255 HPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILV---CD--WPRDVAE-CAGL-PTPQP 307
Query: 331 GCEYQFGIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
CE + G Y +CS+S+ C G C GL + E + C++
Sbjct: 308 TCE-EDG-YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 370 ECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
EC ++ C+ G+ C L+Y+E C+W
Sbjct: 36 ECEPQFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +1
Query: 334 CE-YQFGIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWPDLLQ 486
CE + G Y S C+T Y C C L YD S C W L++
Sbjct: 138 CENLEDGAY-SSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 373 CSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWP 474
CS + C G + F C LV++++S C++P
Sbjct: 415 CSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
protein ZK783.1 protein.
Length = 2585
Score = 32.7 bits (71), Expect = 0.27
Identities = 41/163 (25%), Positives = 57/163 (34%), Gaps = 8/163 (4%)
Frame = +1
Query: 4 NDAQTSR--RTNKPVNMSAKFLYLAACVAFANAGILLEHAPPCPEEYGVQAYAHPEQCDQ 177
+D TSR +K +N+ + Y F G C + + AH CD
Sbjct: 165 SDKLTSRCPEHSKCINLPGTY-YCNCTQGFTPKGNQGSGLDKCADINECETGAH--NCDA 221
Query: 178 FFLCTN--GTLT-VETCENGL-LFDGKGAVHNHCNYNWAVDCGHRTANLEPLSTPGCEYQ 345
+C N G+ V C G L DGK N C C R + + CE +
Sbjct: 222 DEICENSIGSFKCVNKCSPGYELIDGKCEDVNECGSEKLHKCDVRADCVNTIGGYECECE 281
Query: 346 FGIYPDSHECSTSYIKCAYGV--PEQFPCTPGLVYDERSHSCN 468
G D C KC + V P + C +R SC+
Sbjct: 282 EGFEGDGKNCQR---KCGHSVKLPSKSSCRKNSAICDRHASCH 321
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 32.3 bits (70), Expect = 0.35
Identities = 35/143 (24%), Positives = 60/143 (41%)
Frame = +2
Query: 158 IPSSATNSFSALTARSP*RPARTGFSSTERVQFTTTATIIGLLIVVTEQRIWNLYQHPDA 337
+ S+ ++ S+ T+ + +P ++T +V TTT+ VT P
Sbjct: 552 VSSTVVSTKSSTTSSTTTKPTTLSTTTTTQVPSTTTS--------VTVPSTQKATPSPSR 603
Query: 338 NTNSVFTQIATSAPLATLNAHMVSRNNFPAPQAWSTMSAVTAATGLISSNPSVTPRLSLA 517
T T +T+A T +RN P Q TMSA+TA L+S +VT ++ A
Sbjct: 604 TTKKSTTTTSTTA---TPRQATPTRNPLPLLQ---TMSAITAFPTLLSMEKAVTLPINNA 657
Query: 518 SNAHQKYQRTLHRLSSGRSPAFP 586
+ ++ + R+ R P
Sbjct: 658 LGVSKPIKKKIRRIIKRRRNILP 680
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 412 EQFPCTPGLVYDERSHSCNWPDLLQP 489
++ PC PG V+D +S C W QP
Sbjct: 306 QRMPCAPGTVFDVQSQVCVWDTNSQP 331
>U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical
protein C24G7.4 protein.
Length = 663
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = -2
Query: 323 DRGSKFAVL*PQSTAQL*LQWL*TAPFPSKRSPFSQVSTVSVPLVQRKNWSHCS 162
+ G ++ + P + AQL + + +P R+ +S + TV+ L+ R NW +CS
Sbjct: 283 ENGFRYFIHPPGTNAQLTSEGISVSP---SRTVYSAIKTVTHNLLNRGNWGNCS 333
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 320 YQHPDANTNSVFTQIATS--APLATLNAHMVSRNNFPAPQAWSTMSAVTAATGLISSNPS 493
YQ TNS++ I TS A + N H + P+ ++ + + ATGL+S P+
Sbjct: 576 YQQQQTLTNSMYMPIVTSTGAAVPLTNGHHHVATSAPSSAPFTAPARMIGATGLMSYQPT 635
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 373 CSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
CS ++ C+ G+ C L+YD R +C +
Sbjct: 74 CSPQFLTCSGGISRIMDCPADLIYDPRIVACEY 106
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 373 CSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
CS ++ C+ G+ C L+YD R +C +
Sbjct: 74 CSPQFLTCSGGISRIMDCPADLIYDPRIVACEY 106
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 163 EQCDQFFL-CTNGTLTVETCENGLLFDGKGA 252
E C Q + C NG + CENGL F + A
Sbjct: 535 EPCSQHYKNCVNGQEAIFICENGLFFSPEQA 565
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 373 CSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNW 471
CS ++ C+ G+ C L+YD R +C +
Sbjct: 74 CSPQFLTCSGGISRIMDCPADLIYDPRIVACEY 106
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 163 EQCDQFFL-CTNGTLTVETCENGLLFDGKGA 252
E C Q + C NG + CENGL F + A
Sbjct: 535 EPCSQHYKNCVNGQEAIFICENGLFFSPEQA 565
>AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode astacin
protease protein27 protein.
Length = 428
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 503 RLSLASNAHQKYQRTLHRLSSGRSPAFPVPGDCHRLITCVEG 628
R+++ N H++ TL+R G +P P DC + + C +G
Sbjct: 247 RMNVLYNCHERCANTLNRCQQG---GYPAPSDCSQCV-CPDG 284
>Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical
protein F35E8.13 protein.
Length = 249
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 167 CSGCAYAWTPYSSGHGGACSRSIPALAKATQAAR*RNFAL-MFTGLFVRRDVCAS 6
C CA + T SS G CS I + + A +NF F L RR CA+
Sbjct: 190 CGKCASSTTTRSSASTGTCSSFIADTSPSCAAWAGKNFCTNTFYTLAQRRQYCAT 244
>Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical
protein F35E8.10 protein.
Length = 249
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 167 CSGCAYAWTPYSSGHGGACSRSIPALAKATQAAR*RNFAL-MFTGLFVRRDVCAS 6
C CA + T SS G CS I + + A +NF F L RR CA+
Sbjct: 190 CGKCASSTTTRSSASTGTCSSFIADTSPSCAAWAGKNFCTNTFYTLAQRRQYCAT 244
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 344 NSVFTQIAT-SAPLATLNAHMVSRNNFPAPQAWSTMSAVTAATGLISSNPSVTPRLSLAS 520
++ F Q A+ S PL+TL N PAPQ S+ +++T A + PS+ P + AS
Sbjct: 809 DTFFLQYASNSQPLSTLPPPPPP-NPPPAPQPPSSAASLTPAPSAAQNAPSIAPSTTEAS 867
>AF003133-1|AAB54137.2| 207|Caenorhabditis elegans Hypothetical
protein T21E3.2 protein.
Length = 207
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = +2
Query: 341 TNSVFTQIATSAPLATLNAHMVSRNNFPAPQAWSTMSAVTAATGLISSNPSVTPRLSLAS 520
T+S+ T+ TSA LA VS+ + P +ST+S + + NP+ ++
Sbjct: 37 TSSITTKTITSADLADKTD--VSKTSTPVSTNYSTVSKTISMQKEVEKNPNSAEDFNVNR 94
Query: 521 NAHQKYQRTLHRLSSGRSPAF 583
K+Q + ++ P F
Sbjct: 95 KKTSKFQISKESVAVEMKPDF 115
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 353 FTQIATSAPLATLNAHMVSRNNFPAPQAWSTMSAVTAATGLISSNPSVTP 502
FT +A AP L AH + P + ST S+V ISS+ S P
Sbjct: 139 FTSLARIAPF--LQAHQHQQQAQAKPDSISTASSVVGTPSSISSSSSTPP 186
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 349 GIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWPD 477
G + +C +I+C G+ F C GL + + C+ PD
Sbjct: 570 GFFGVPSDC-LKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +2
Query: 323 QHPDANTNSVFTQIATSAPLATLNAHMVSRNNFPAPQAWST-MSAVTAATGLISS--NPS 493
Q PD+ + +T+ P+AT N ++ N +A S+ SA T T +S P
Sbjct: 236 QKPDSTEEATSPSQSTTTPVATQNPTTSNQKNETTDEATSSPQSAKTPVTNPTTSPQKPD 295
Query: 494 VT-PRLSLASNAHQKYQRTLHR 556
T L L + K +T HR
Sbjct: 296 TTEAALPLTTATTTKATQTSHR 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,569,462
Number of Sequences: 27780
Number of extensions: 443148
Number of successful extensions: 1386
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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