Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5476
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.2  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   6.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 421 PCTPGLVYDERSHSCNW 471
           PC PG++  ++  +C W
Sbjct: 452 PCEPGMIKKQQGDTCCW 468


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 421 PCTPGLVYDERSHSCNW 471
           PC PG++  ++  +C W
Sbjct: 542 PCEPGMIKKQQGDTCCW 558


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 129 RAWWSVLQKYSRVSESNASGEIKELCTHV 43
           R  WS LQ +     +  SG  + LC H+
Sbjct: 129 RIQWSKLQVFDCRYVTTTSGMFEALCNHI 157


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 187 CTNGTLTVETCENGLLF 237
           C N   + + CENGL F
Sbjct: 118 CINANKSTDKCENGLNF 134


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 627 VKPRLITCEKGKVFDDQNLTWGKSKNRS 710
           V PRL   + G V    NLT  K +  S
Sbjct: 279 VSPRLYDRQNGLVLSRMNLTLAKMEKTS 306


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 594  PGTGKAGERPELS 556
            PG G   +RPELS
Sbjct: 1873 PGNGDRSDRPELS 1885


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 594  PGTGKAGERPELS 556
            PG G   +RPELS
Sbjct: 1869 PGNGDRSDRPELS 1881


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,467
Number of Sequences: 438
Number of extensions: 5657
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)