Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5470
(621 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 308 3e-85
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 308 4e-85
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 308 4e-85
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 185 4e-48
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 177 1e-45
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 115 6e-27
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 58 1e-09
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 49 6e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 48 1e-06
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 42 7e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 42 7e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 40 3e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 9e-04
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.025
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 33 0.033
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.31
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.41
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 29 0.72
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 2.9
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 3.8
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 3.8
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 3.8
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 26 5.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 5.1
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 25 6.7
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 6.7
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 8.8
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 308 bits (757), Expect = 3e-85
Identities = 146/168 (86%), Positives = 157/168 (93%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGE
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGE 122
Query: 473 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 616
FEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI
Sbjct: 123 FEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 308 bits (756), Expect = 4e-85
Identities = 145/168 (86%), Positives = 157/168 (93%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGE
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGE 122
Query: 473 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 616
FEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI
Sbjct: 123 FEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 308 bits (756), Expect = 4e-85
Identities = 145/168 (86%), Positives = 157/168 (93%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDK
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
LKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGE
Sbjct: 63 LKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGE 122
Query: 473 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 616
FEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI
Sbjct: 123 FEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 185 bits (451), Expect = 4e-48
Identities = 83/165 (50%), Positives = 116/165 (70%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 298
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 299 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 478
ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFE
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355
Query: 479 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 613
AG + GQTREHA+LA T G+ L+V +NKMD +SE R++E
Sbjct: 356 AGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKE 400
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 177 bits (431), Expect = 1e-45
Identities = 85/167 (50%), Positives = 112/167 (67%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 298
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 299 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 478
ER RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFE 294
Query: 479 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
G +NGQTREHA L LG+ +++V VNK+D +SE RF+EIK
Sbjct: 295 RGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIK 339
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 115 bits (276), Expect = 6e-27
Identities = 68/164 (41%), Positives = 93/164 (56%)
Frame = +2
Query: 107 WARKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 286
+ RKK H+NI IGHVD GK+T T I KC ++G+ SF +
Sbjct: 47 FVRKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQI 91
Query: 287 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 466
DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A
Sbjct: 92 DKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATD 151
Query: 467 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 598
G+ QTREH LLA +GVKQ++V +NK+D EP E
Sbjct: 152 GQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIE 188
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 58.0 bits (134), Expect = 1e-09
Identities = 48/148 (32%), Positives = 70/148 (47%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 490
RGITI+ A F + +ID PGH DF + + D AV I+ + AG+
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV- 130
Query: 491 KNGQTREHALLAFTLGVKQLIVGVNKMD 574
QT+ A G+ ++I VNKMD
Sbjct: 131 -EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 48.8 bits (111), Expect = 6e-07
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
R K NI + H+DSGK+T T ++Y G I K+ E+ +G +D
Sbjct: 55 RLKQIRNIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDF 104
Query: 293 LKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIKNMI 415
++ ERE+GITI A W+ FE S Y + IID PGH DF +
Sbjct: 105 MELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTIEVE 163
Query: 416 TGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 514
D AVL++ A +G I+ + Q R +
Sbjct: 164 RALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 47.6 bits (108), Expect = 1e-06
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 311 RGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
RGIT+ ++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 41.9 bits (94), Expect = 7e-05
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 301
N+ VI HVD GKST T L+ K G I K +F + A E +G + + L A
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFA 79
Query: 302 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 454
E D+ + + + V +ID+PGH DF + D A+++V
Sbjct: 80 EMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 41.9 bits (94), Expect = 7e-05
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKA 301
N+ VI HVD GKST T L+ K G I K +F + A E +G + + L A
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFA 79
Query: 302 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 454
E D+ + + + V +ID+PGH DF + D A+++V
Sbjct: 80 EMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +2
Query: 362 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 541
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 542 KQLIVGVNKMDSTEPPYSEPRFEEI 616
K +I+ NK+D +E ++ I
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSI 187
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.1 bits (77), Expect(2) = 9e-04
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 254 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 427
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 428 QADCAVLIVAAGTG 469
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
Score = 22.2 bits (45), Expect(2) = 9e-04
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 134 IVVIGHVDSGKST 172
+ ++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 33.5 bits (73), Expect = 0.025
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 301
N ++ HVD GK+T L+ G I + T+ + E+ +G + K A
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74
Query: 302 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
I K Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 33.1 bits (72), Expect = 0.033
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +2
Query: 140 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 313
++GHVD+GK+ +L + +++ E Q++G F + K K ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541
Query: 314 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 454
G K + + + IID PGH F GTS + A+L++
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.31
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 287 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 409
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.41
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 324 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 196
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 28.7 bits (61), Expect = 0.72
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
+ +V GH+ GKS L+Y + + + S +Y D ERE
Sbjct: 142 SFIVAGHLHHGKSALLDLLVYYT-----------HPDTKPPKRRSLRYT---DTHYLERE 187
Query: 311 RGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 454
R ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 188 RVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 2.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 348 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 217
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 89 NSTNQKWARKKTHINIVVIGHVDSGKSTTTGHLI 190
N +++ R+ + N++V+G SGKST L+
Sbjct: 83 NQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLL 116
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 41 KKILFCEVKK*NQYTHNSTNQKWARKKTHINI 136
+ I+FC KK +Y H +Q TH+ I
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTI 1448
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 41 KKILFCEVKK*NQYTHNSTNQKWARKKTHINI 136
+ I+FC KK +Y H +Q TH+ I
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTI 1448
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 5.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 98 NQKWARKKTHINIVVIGHVDSGKST 172
N+K R+ N++V+G SGKST
Sbjct: 23 NRKLIRRGFQFNVMVVGPSGSGKST 47
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 314 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 216
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 89 NSTNQKWAR--KKTHINIVVIGHVDSGKST 172
NS N+K KK H ++ GH DS ST
Sbjct: 77 NSNNEKHENSDKKIHTTVLASGHEDSDYST 106
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 293 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 165
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 8.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 248 PGPPSRTSRWYVCQYHHIC 192
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,531,019
Number of Sequences: 5004
Number of extensions: 49522
Number of successful extensions: 174
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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