Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5470
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 331 3e-91
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 331 3e-91
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 298 2e-81
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 239 5e-69
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 208 2e-54
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 208 2e-54
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 190 9e-49
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 131 3e-31
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 93 1e-19
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 93 1e-19
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 91 8e-19
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 91 8e-19
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 91 8e-19
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 7e-06
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 46 2e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.008
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.071
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.071
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 33 0.12
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.12
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.29
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.0
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.0
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 3.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.2
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 28 6.2
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 331 bits (813), Expect = 3e-91
Identities = 155/168 (92%), Positives = 161/168 (95%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 473 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 616
FEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEI 170
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 331 bits (813), Expect = 3e-91
Identities = 155/168 (92%), Positives = 161/168 (95%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 473 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 616
FEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEI 170
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 298 bits (731), Expect = 2e-81
Identities = 144/169 (85%), Positives = 152/169 (89%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 473 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
FEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I+
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQ 168
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 239 bits (584), Expect(2) = 5e-69
Identities = 109/115 (94%), Positives = 114/115 (99%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 457
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 40.3 bits (90), Expect(2) = 5e-69
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +2
Query: 548 LIVGVNKMDSTEPPYSEPRFEEI 616
L+V NKMDSTEPP+SE RF EI
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEI 136
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 208 bits (509), Expect = 2e-54
Identities = 98/167 (58%), Positives = 125/167 (74%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 298
K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 299 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 478
ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 228 EERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFE 287
Query: 479 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK
Sbjct: 288 TGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIK 332
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 208 bits (509), Expect = 2e-54
Identities = 98/167 (58%), Positives = 125/167 (74%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 298
K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 299 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 478
ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 246 EERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFE 305
Query: 479 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK
Sbjct: 306 TGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIK 350
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 190 bits (462), Expect = 9e-49
Identities = 85/167 (50%), Positives = 119/167 (71%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 298
K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 299 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 478
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFE 226
Query: 479 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
G + GQTREH++L T GVK L++ VNKMD + E RF+EI+
Sbjct: 227 TGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIE 273
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 131 bits (317), Expect = 3e-31
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 293 LKAER 307
LK +
Sbjct: 63 LKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 93.5 bits (222), Expect = 1e-19
Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Frame = +2
Query: 110 ARKKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 283
A K ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 40 ATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE--------------- 82
Query: 284 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 463
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 464 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 583
G E QT+EH +LA +GVK + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 93.5 bits (222), Expect = 1e-19
Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Frame = +2
Query: 110 ARKKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 283
A K ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 40 ATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE--------------- 82
Query: 284 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 463
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 464 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 583
G E QT+EH +LA +GVK + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 90.6 bits (215), Expect = 8e-19
Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
R K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 473 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 604
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 186
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 90.6 bits (215), Expect = 8e-19
Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
R K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 473 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 604
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 90.6 bits (215), Expect = 8e-19
Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
R K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 473 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 604
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.7 bits (138), Expect = 2e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 490
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 491 KNGQTREHALLAFTLGVKQLIVGVNKMD 574
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.0 bits (129), Expect = 2e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 490
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 491 KNGQTREHALLAFTLGVKQLIVGVNKMD 574
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 2e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 7e-06
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +2
Query: 254 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 430
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 431 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 574
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 7e-06
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 134 IVVIGHVDSGKST 172
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 46.4 bits (105), Expect = 2e-05
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGS 265
RK+ N+ VI HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 266 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 433
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVT 134
Query: 434 DCAVLIVAAGTG 469
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 46.0 bits (104), Expect = 2e-05
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGS 265
RK+ N+ VI HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 266 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 433
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVT 134
Query: 434 DCAVLIVAAGTG 469
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 41.1 bits (92), Expect = 6e-04
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = +2
Query: 128 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 307
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 308 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 484
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 485 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 583
I QT EH LLA ++I+ +NK D E
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE 139
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.9 bits (84), Expect = 0.006
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 125 HI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 301
HI N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSRED 63
Query: 302 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 454
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.9 bits (84), Expect = 0.006
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 125 HI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 301
HI N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSRED 63
Query: 302 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 454
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 362 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 541
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 542 KQLIVGVNKMDSTEPPYSEPRFEEI 616
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.071
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.071
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 131 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 311 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 469
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 33.5 bits (73), Expect = 0.12
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Frame = +2
Query: 128 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 301
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 302 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 463
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 464 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 574
+ GI+ TREH L L + ++ + KMD
Sbjct: 285 ----DRGIT--WATREHLGLIAALNIPMFVL-ITKMD 314
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 567 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 439
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +2
Query: 371 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 550
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 551 IVGVNKMDSTEPPYSEPR 604
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 310
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 128 INIVVIGHVDSGKSTTT 178
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical
protein F56H9.4 protein.
Length = 390
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHL-IYKCGG 205
RKK + +++IG +SGKST + I CGG
Sbjct: 40 RKKKALKLLIIGPGESGKSTIVKQVRILHCGG 71
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 3.5
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 550 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 392
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 391 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 272
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 365 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 460
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 123 VFFLAHFWLVELWVY*FHFFTSQNNIFLTLTTDYKLRV 10
+ F F ++ + V HF SQ+N+ L LT D + +
Sbjct: 12 IIFYVLFLIIPIKVTSIHFVDSQHNVILILTDDQDIEL 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,181,331
Number of Sequences: 27780
Number of extensions: 283908
Number of successful extensions: 842
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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