Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5470
(621 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 348 2e-98
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 341 3e-96
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 237 6e-65
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 204 5e-55
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 6e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.79
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 1.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.5
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 348 bits (856), Expect = 2e-98
Identities = 165/169 (97%), Positives = 167/169 (98%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE
Sbjct: 63 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 122
Query: 473 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIK
Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIK 171
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 341 bits (839), Expect = 3e-96
Identities = 161/169 (95%), Positives = 165/169 (97%)
Frame = +2
Query: 113 RKKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 292
++K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 293 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 472
LKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGE 122
Query: 473 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIK
Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIK 171
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 237 bits (580), Expect = 6e-65
Identities = 113/114 (99%), Positives = 113/114 (99%)
Frame = +2
Query: 278 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 457
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 458 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIK
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIK 114
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 204 bits (498), Expect = 5e-55
Identities = 97/98 (98%), Positives = 97/98 (98%)
Frame = +2
Query: 326 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 505
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 506 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 619
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIK
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIK 98
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.1 bits (77), Expect = 6e-04
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +2
Query: 365 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 544
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 545 QLIVGVNKMDSTEPPYSEPRFEEIK 619
+IV +NK+D + ++E K
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAK 271
Score = 25.4 bits (53), Expect = 0.45
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKST 172
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.6 bits (51), Expect = 0.79
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 116 KKTHINIVVIGHVDSGKST 172
++ INI IGHV GKST
Sbjct: 39 RQATINIGTIGHVAHGKST 57
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 74 NQYTHNSTNQKWARKKTHINIVVIGHV 154
N+ HN+ N K KK + NI+ I +
Sbjct: 320 NKTIHNNNNYKNYNKKLYYNIINIEQI 346
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 350 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 451
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 350 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 451
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 74 NQYTHNSTNQKWARKKTHINIVVIGHV 154
N Y + + N + KK + NI+ I +
Sbjct: 307 NNYNYKNYNNNYNSKKLYYNIINIEQI 333
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 74 NQYTHNSTNQKWARKKTHINIVVIGHV 154
N Y + + N + KK + NI+ I +
Sbjct: 318 NNYNYKNYNNNYNSKKLYYNIINIEQI 344
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMG 256
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 511 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 425
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMG 256
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMG 256
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,725
Number of Sequences: 438
Number of extensions: 3488
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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