Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5468
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   4.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.8  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   6.3  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   6.3  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   6.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.4  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 19  CPPFSRATHPDGIKHRA 69
           CPP  R T+ + IKH +
Sbjct: 212 CPPAPRLTNSNSIKHES 228


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -2

Query: 174 FELLIVHFVFGHKSFSIHICANRNGDSTLIFDLINSPVFDT 52
           F + I  +   HK F+ HI  N +        +   P +D+
Sbjct: 486 FLIKIRQYRLNHKPFNFHITINADKPMKAAIRIFIGPKYDS 526


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -2

Query: 174 FELLIVHFVFGHKSFSIHICANRNGDSTLIFDLINSPVFDT 52
           F + I  +   HK F+ HI  N +        +   P +D+
Sbjct: 486 FLIKIRQYRLNHKPFNFHITINADKPMKAAIRIFIGPKYDS 526


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 365 FTAIDVIDCYKRKVVSPLTHTY 300
           FT ++V+   KR++   L HTY
Sbjct: 231 FTCLEVVFVLKRRLGYYLFHTY 252


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 432 RILSQYRCERFC 467
           +I+++Y CER C
Sbjct: 240 QIMARYNCERLC 251


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 341 SR*HRSL*NSGGSFKLNLSGYKRAYC 418
           S+ H+ + +   ++  N + YK+ YC
Sbjct: 76  SKEHKIISSLSNNYNYNNNNYKKLYC 101


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 341 SR*HRSL*NSGGSFKLNLSGYKRAYC 418
           S+ H+ + +   ++  N + YK+ YC
Sbjct: 76  SKEHKIISSLSNNYNYNNNNYKKLYC 101


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 341 SR*HRSL*NSGGSFKLNLSGYKRAYC 418
           S+ H+ + +   ++  N + YK+ YC
Sbjct: 76  SKEHKIISSLSNNYNYNNNNYKKLYC 101


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 19   CPPFSRATHPDGIKHRAV 72
            CPP  R    +G+ HR +
Sbjct: 1701 CPPPPRMGSAEGLSHRGM 1718


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 129 SIHICANRNGDSTLIFDLINSPVFDT 52
           S H C  +NGD T I   I + +  T
Sbjct: 21  SPHTCRTKNGDYTKIMPDILTAIGQT 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,992
Number of Sequences: 438
Number of extensions: 2998
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)