Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5467
(556 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 299 2e-83
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 295 2e-82
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 180 7e-48
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 147 6e-38
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.90
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.7
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 299 bits (733), Expect = 2e-83
Identities = 141/142 (99%), Positives = 141/142 (99%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 402
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 403 GEFEAGISKNGQTREHALLAFT 468
GEFEAGISKNGQTREHALLAFT
Sbjct: 121 GEFEAGISKNGQTREHALLAFT 142
Score = 60.9 bits (141), Expect = 8e-12
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 470 LGVKQLIVGVNKMDSTEPPYSEPRFEEIK 556
LGVKQLIVGVNKMDSTEPPYSE RFEEIK
Sbjct: 143 LGVKQLIVGVNKMDSTEPPYSETRFEEIK 171
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 295 bits (724), Expect = 2e-82
Identities = 139/142 (97%), Positives = 140/142 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 402
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 403 GEFEAGISKNGQTREHALLAFT 468
GEFEAGISKNGQTREHALLAFT
Sbjct: 121 GEFEAGISKNGQTREHALLAFT 142
Score = 57.6 bits (133), Expect = 8e-11
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2
Query: 470 LGVKQLIVGVNKMDSTEPPYSEPRFEEIK 556
LGVKQLIVGVNKMD T+PPYSE RFEEIK
Sbjct: 143 LGVKQLIVGVNKMDMTDPPYSEARFEEIK 171
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 180 bits (439), Expect = 7e-48
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +1
Query: 214 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 393
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 394 AGTGEFEAGISKNGQTREHALLAFT 468
AGTGEFEAGISKNGQTREHALLAFT
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFT 85
Score = 60.9 bits (141), Expect = 8e-12
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 470 LGVKQLIVGVNKMDSTEPPYSEPRFEEIK 556
LGVKQLIVGVNKMDSTEPPYSE RFEEIK
Sbjct: 86 LGVKQLIVGVNKMDSTEPPYSETRFEEIK 114
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 147 bits (357), Expect = 6e-38
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = +1
Query: 262 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 441
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 442 REHALLAFT 468
REHALLAFT
Sbjct: 61 REHALLAFT 69
Score = 60.9 bits (141), Expect = 8e-12
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +2
Query: 470 LGVKQLIVGVNKMDSTEPPYSEPRFEEIK 556
LGVKQLIVGVNKMDSTEPPYSE RFEEIK
Sbjct: 70 LGVKQLIVGVNKMDSTEPPYSETRFEEIK 98
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.39
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKST 108
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.90
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 64 INIVVIGHVDSGKST 108
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 56 FSLPIFG*SRITNCV*Y 6
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 286 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 387
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 286 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 387
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 447 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 361
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,252
Number of Sequences: 438
Number of extensions: 3067
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -