BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5466
(631 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119087-1|AAM50947.1| 704|Drosophila melanogaster LP11564p pro... 31 1.7
AE014134-1105|AAF52394.3| 704|Drosophila melanogaster CG31638-P... 31 1.7
>AY119087-1|AAM50947.1| 704|Drosophila melanogaster LP11564p
protein.
Length = 704
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 375 NFTFSLVVGPLGSPHGRYHHPAYFRREAVMRYGSKGAVA 491
N F +PHG++HH +R RYGS G+ A
Sbjct: 607 NLEFERAKQKFDNPHGQHHHHHQRQRSGNGRYGSAGSSA 645
>AE014134-1105|AAF52394.3| 704|Drosophila melanogaster CG31638-PA
protein.
Length = 704
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 375 NFTFSLVVGPLGSPHGRYHHPAYFRREAVMRYGSKGAVA 491
N F +PHG++HH +R RYGS G+ A
Sbjct: 607 NLEFERAKQKFDNPHGQHHHHHQRQRSGNGRYGSAGSSA 645
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,871,318
Number of Sequences: 53049
Number of extensions: 554008
Number of successful extensions: 1323
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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