Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5460
(519 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for ... 29 9.8
Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for ... 29 9.8
M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common ant... 29 9.8
BC014239-1|AAH14239.1| 756|Homo sapiens PTPRC protein protein. 29 9.8
AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine phosph... 29 9.8
AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine phosph... 29 9.8
AL355988-1|CAI19377.1| 753|Homo sapiens protein tyrosine phosph... 29 9.8
AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine phosph... 29 9.8
AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine phosph... 29 9.8
AL157402-2|CAI15639.1| 753|Homo sapiens protein tyrosine phosph... 29 9.8
>Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for
leukocyte common antigen (T200). ).
Length = 1304
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 344 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 375
>Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for
T200 leukocyte common antigen (CD45, LC-A). ).
Length = 1143
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 183 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 214
>M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common
antigen precursor protein.
Length = 1114
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 154 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 185
>BC014239-1|AAH14239.1| 756|Homo sapiens PTPRC protein protein.
Length = 756
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 296 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 327
>AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 346 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 377
>AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 185 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 216
>AL355988-1|CAI19377.1| 753|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 753
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 298 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 329
>AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1306
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 346 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 377
>AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 1145
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 185 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 216
>AL157402-2|CAI15639.1| 753|Homo sapiens protein tyrosine
phosphatase, receptor type, C protein.
Length = 753
Score = 29.1 bits (62), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 222 NQIYHTSRVLFQNLH*IHRTLCVTEILYNNSR 127
N I+ + +NL H C +EILYNN +
Sbjct: 298 NMIFDNKEIKLENLEPEHEYKCDSEILYNNHK 329
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,651,085
Number of Sequences: 237096
Number of extensions: 1057234
Number of successful extensions: 1752
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1752
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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