Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5457
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   2.6  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   6.0  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   6.0  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   6.0  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    20   8.0  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    20   8.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 37  SEVSIHLSYISCPVRSLTYIH 99
           S ++I + YISCP  S+ + H
Sbjct: 180 SILAIKVYYISCPEISVNFAH 200


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 323 NQLTERTCRRMSYAYVSRCYGDRS 252
           N L E+T  R  YA+V    G RS
Sbjct: 464 NFLPEKTANRHYYAFVPFSAGPRS 487


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 257 GRRNTVRHMRNSCD 298
           G  NT  H R SCD
Sbjct: 77  GLTNTASHTRLSCD 90


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 257 GRRNTVRHMRNSCD 298
           G  NT  H R SCD
Sbjct: 82  GLTNTASHTRLSCD 95


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 257 GRRNTVRHMRNSCD 298
           G  NT  H R SCD
Sbjct: 82  GLTNTASHTRLSCD 95


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 144 QKIYASNHKSLLLSSMYICQ 85
           +K+Y +N+K L  +  YI Q
Sbjct: 97  KKLYCNNYKKLYYNINYIEQ 116


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 144 QKIYASNHKSLLLSSMYICQ 85
           +K+Y +N+K L  +  YI Q
Sbjct: 97  KKLYCNNYKKLYYNINYIEQ 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,321
Number of Sequences: 438
Number of extensions: 1481
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)