Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5452
         (496 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF495537-1|AAM18059.1|  527|Drosophila melanogaster prolyl 4-hyd...    31   0.65 
AE014297-4609|AAG22175.1|  527|Drosophila melanogaster CG1546-PA...    31   0.65 
AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA...    29   4.6  
AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-P...    28   8.0  

>AF495537-1|AAM18059.1|  527|Drosophila melanogaster prolyl
           4-hydroxylase alpha-relatedprotein PH4[alpha]SG2
           protein.
          Length = 527

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -3

Query: 224 FFYQYIFPVSLEHTTEVKELKIDD---HNCKVFEIIRRIIRN 108
           F+ +Y+  +  EH     +LK+DD   H    F +I+R++R+
Sbjct: 59  FYRRYVEQIKREHEWATSQLKLDDYLGHPLHAFRLIKRLVRD 100


>AE014297-4609|AAG22175.1|  527|Drosophila melanogaster CG1546-PA,
           isoform A protein.
          Length = 527

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -3

Query: 224 FFYQYIFPVSLEHTTEVKELKIDD---HNCKVFEIIRRIIRN 108
           F+ +Y+  +  EH     +LK+DD   H    F +I+R++R+
Sbjct: 59  FYRRYVEQIKREHEWATSQLKLDDYLGHPLHAFRLIKRLVRD 100


>AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA,
            isoform A protein.
          Length = 2061

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/78 (21%), Positives = 34/78 (43%)
 Frame = -3

Query: 350  DDSDRIDICCQKCYLYHNVPKTSYEIYPSINLVDLSYLARERFFYQYIFPVSLEHTTEVK 171
            +DS RI + C+    +  + + + E++    LV      R   FY   F  +     + K
Sbjct: 975  NDSTRIILLCENYRAHEAIIRFTSELFYEQKLVASGKQPRHDRFYPLTFFTTRGEDVQDK 1034

Query: 170  ELKIDDHNCKVFEIIRRI 117
                  +N +V+E++ R+
Sbjct: 1035 NSTAFYNNAEVYEVVERV 1052


>AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-PB
           protein.
          Length = 4547

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +2

Query: 53  DRRWC*DRSFECARWALCDFELCA-*LFQTLCNCDRQFSIL*LPSC-APN 196
           D R C D   ECA W  CD +LC   L    C C + ++++    C AP+
Sbjct: 224 DNRTCVDLD-ECAEWGHCD-QLCTNTLGSYTCQCAQGYTLINDSKCIAPD 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,667,704
Number of Sequences: 53049
Number of extensions: 472716
Number of successful extensions: 1128
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)