Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5452
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 33 0.086
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 33 0.086
Z81071-7|CAE11303.1| 313|Caenorhabditis elegans Hypothetical pr... 30 0.80
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 28 4.3
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 27 7.5
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 27 7.5
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z66563-1|CAA91468.1| 306|Caenorhabditis elegans Hypothetical pr... 27 7.5
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr... 27 7.5
U41557-7|AAQ01534.1| 381|Caenorhabditis elegans Hypothetical pr... 27 7.5
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 27 7.5
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 27 7.5
Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 33.5 bits (73), Expect = 0.086
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -3
Query: 275 IYPSINLVDLSYLARERFFYQYIFPVSLEHTTEVKELKIDDHNC-KVF--EIIRRIIRNH 105
IYP N ++L +FF QY+ P L +++ +D +N +VF EI+ +++
Sbjct: 566 IYPLFNFLNLFPFGSPQFFSQYVHPQYLNFALSLRDEALDKNNLPRVFLLEILSKMMSRK 625
Query: 104 KEPNERIQ 81
+ ++ +Q
Sbjct: 626 TKQDKSVQ 633
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 33.5 bits (73), Expect = 0.086
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -3
Query: 275 IYPSINLVDLSYLARERFFYQYIFPVSLEHTTEVKELKIDDHNC-KVF--EIIRRIIRNH 105
IYP N ++L +FF QY+ P L +++ +D +N +VF EI+ +++
Sbjct: 566 IYPLFNFLNLFPFGSPQFFSQYVHPQYLNFALSLRDEALDKNNLPRVFLLEILSKMMSRK 625
Query: 104 KEPNERIQ 81
+ ++ +Q
Sbjct: 626 TKQDKSVQ 633
>Z81071-7|CAE11303.1| 313|Caenorhabditis elegans Hypothetical
protein F28F8.8 protein.
Length = 313
Score = 30.3 bits (65), Expect = 0.80
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = -3
Query: 266 SINLVDLSYLARERFFYQYIFPVSLEH--TTEVKELKIDDHNCKVFEIIRRIIR-NHKEP 96
S+ VD+ L F ++ I P+ L++ + +++LKIDDH C F+ I +++ NH +
Sbjct: 148 SVKKVDVGKLTITGFIHEEI-PMILQYFGSDNIQDLKIDDHIC--FDHIGKVVESNHWKK 204
Query: 95 NERIQTI 75
+ I I
Sbjct: 205 AKSIHFI 211
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 200 VSLEHTTEVKELKIDDHNCKVFEIIRRIIRNH 105
+ HTTE KI+DHN VF + + ++H
Sbjct: 67 IKAPHTTESSMKKIEDHNTLVFIVDEKANKHH 98
>Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical
protein ZK643.3b protein.
Length = 522
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 439 IPDAPLAIIDSKTTRAHGFCILWFTSKSRWTILTA*TYAVKNAIYI 302
+ DAPL+ S+ + H FC L F+ + R+ LT T+ + A+Y+
Sbjct: 282 VNDAPLS---SQVFQNHLFCRLLFSIQLRYLRLTNFTWMLAEAVYL 324
>Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical
protein ZK643.3a protein.
Length = 480
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 439 IPDAPLAIIDSKTTRAHGFCILWFTSKSRWTILTA*TYAVKNAIYI 302
+ DAPL+ S+ + H FC L F+ + R+ LT T+ + A+Y+
Sbjct: 282 VNDAPLS---SQVFQNHLFCRLLFSIQLRYLRLTNFTWMLAEAVYL 324
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 383 LYIVVHIEKPLDDSDRIDICCQKCYLYHNVPKTSYEIYPSINLV 252
L+ VH + L D DI YL+H +P+ + + P ++L+
Sbjct: 22 LWNTVHGAQLLPDLGTDDIGKNNEYLFHRIPRATDNLIPIVSLI 65
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 785 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 822
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 1124 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 1161
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 444 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 481
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 782 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 819
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 785 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 822
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 1124 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 1161
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 782 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 819
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 785 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 822
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 1124 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 1161
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 444 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 481
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 782 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 819
>Z66563-1|CAA91468.1| 306|Caenorhabditis elegans Hypothetical
protein F46C3.2 protein.
Length = 306
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 246 EVDQIDRRIYFVRGLWNVVI*IAFLTAYVYA 338
E+++ D RIYFV+GL +++ L A VYA
Sbjct: 231 ELNKFDLRIYFVKGLQFILLWYTMLLA-VYA 260
>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
protein F02C9.3 protein.
Length = 1064
Score = 27.1 bits (57), Expect = 7.5
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -3
Query: 242 YLARERFFYQYIFPVSLEHTTEVKELKIDDHNCKVFEIIRRIIRNHKEPNE--RIQTIDL 69
YLAR + YI P+SL ++ +L I ++R+ P E RI +
Sbjct: 372 YLARFILLFSYIIPISLRTNVDMAKLFYSWQIGHDHHIPETVVRSSTIPEELGRISFLLS 431
Query: 68 STTGGLVLRETY 33
TG L E +
Sbjct: 432 DKTGTLTKNEMH 443
>U41557-7|AAQ01534.1| 381|Caenorhabditis elegans Hypothetical
protein C50F7.1b protein.
Length = 381
Score = 27.1 bits (57), Expect = 7.5
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 307 YITTFQRPRTKYILLSIWSTSAI 239
Y T++ R TKY++ ++W +AI
Sbjct: 137 YNTSWDREYTKYVIFAVWLVAAI 159
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 342 RIVQRLFDVNHNIQKPCARVVFESIIASGASGIAHVLL 455
++++ +FDV+ NIQK + V SI+ + A + L
Sbjct: 785 QMIRTVFDVDENIQKETLKTVKASILEGSSKWSAKITL 822
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 305 YHNVPKTSYEIYPSINLVDLSYLAR-ERFFYQYIFPVSLEHTTEVKELKIDDHNCKVFEI 129
Y +V K Y I+ L+D ++ + F + V +KE ID C V EI
Sbjct: 208 YGDVCKIDYGIHVRGRLIDSAFTVHFDPKFDPLVEAVREATNAGIKESGIDVRLCDVGEI 267
Query: 128 IRRIIRNHK 102
+ ++ +H+
Sbjct: 268 VEEVMTSHE 276
>Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical
protein F32D8.2 protein.
Length = 568
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 125 RRIIRNHKEPNERIQTIDLSTTGGLVLRETYTN 27
+ I+R + NE + +DLS+ G L LR TN
Sbjct: 93 QHIVRGECKINELNEKVDLSSDGYLTLRSKNTN 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,880,138
Number of Sequences: 27780
Number of extensions: 257895
Number of successful extensions: 679
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -