Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5447
(488 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013014-1|AAH13014.1| 316|Homo sapiens Yip1 domain family, mem... 81 2e-15
BC000056-1|AAH00056.1| 316|Homo sapiens YIPF2 protein protein. 81 2e-15
BC064590-1|AAH64590.1| 306|Homo sapiens Yip1 domain family, mem... 77 4e-14
BC009674-1|AAH09674.1| 123|Homo sapiens YIPF1 protein protein. 72 1e-12
AK000823-1|BAA91389.1| 123|Homo sapiens protein ( Homo sapiens ... 72 1e-12
BC008755-1|AAH08755.1| 867|Homo sapiens ABCA2 protein protein. 35 0.17
AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette, ... 35 0.17
AL807752-21|CAI12767.1| 267|Homo sapiens ATP-binding cassette, ... 35 0.17
AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2 p... 35 0.17
AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2 p... 35 0.17
AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette su... 35 0.17
AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant... 35 0.17
AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein. 35 0.17
>BC013014-1|AAH13014.1| 316|Homo sapiens Yip1 domain family, member
2 protein.
Length = 316
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = +3
Query: 3 LALWGVLKWTTLPDGQDEIETQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWL 182
LALWG L+W Q+ + T + C+YGYSL ++IP+ + W I + WLQWL
Sbjct: 178 LALWGFLRWRK--GVQERMGPYT-----FLETVCIYGYSLFVFIPMVVLWLIPVPWLQWL 230
Query: 183 FVLMAAFVSGAVLIFWLLPALKKSKYFY--MLVGSILAFHFLLATGFMLYFF 332
F +A +S A L+F L P +++ +L+ ++ H LLA G LYFF
Sbjct: 231 FGALALGLSAAGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFF 282
>BC000056-1|AAH00056.1| 316|Homo sapiens YIPF2 protein protein.
Length = 316
Score = 81.0 bits (191), Expect = 2e-15
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = +3
Query: 3 LALWGVLKWTTLPDGQDEIETQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWL 182
LALWG L+W Q+ + T + C+YGYSL ++IP+ + W I + WLQWL
Sbjct: 178 LALWGFLRWRK--GVQERMGPYT-----FLETVCIYGYSLFVFIPMVVLWLIPVPWLQWL 230
Query: 183 FVLMAAFVSGAVLIFWLLPALKKSKYFY--MLVGSILAFHFLLATGFMLYFF 332
F +A +S A L+F L P +++ +L+ ++ H LLA G LYFF
Sbjct: 231 FGALALGLSAAGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFF 282
>BC064590-1|AAH64590.1| 306|Homo sapiens Yip1 domain family, member
1 protein.
Length = 306
Score = 76.6 bits (180), Expect = 4e-14
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = +3
Query: 3 LALWGVLKWTTLPDGQDEIETQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWL 182
LALWG L W + S S + + C+YGYSL IYIP AI W I ++W+
Sbjct: 177 LALWGFLMWRNS-------KVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWI 229
Query: 183 FVLMAAFVSGAVLIFWLLPALKKSKYFYML--VGSILAFHFLLATGFMLYFFHGP 341
V++A +SG++L PA+++ L + +I+ H LL+ G + YFF P
Sbjct: 230 LVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAP 284
>BC009674-1|AAH09674.1| 123|Homo sapiens YIPF1 protein protein.
Length = 123
Score = 71.7 bits (168), Expect = 1e-12
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +3
Query: 78 SPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSGAVLIFWLLPALKKSK 257
S S + + C+YGYSL IYIP AI W I ++W+ V++A +SG++L PA+++
Sbjct: 12 SYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDN 71
Query: 258 YFYML--VGSILAFHFLLATGFMLYFFHGP 341
L + +I+ H LL+ G + YFF P
Sbjct: 72 RRVALATIVTIVLLHMLLSVGCLAYFFDAP 101
>AK000823-1|BAA91389.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ20816 fis, clone ADSE00693. ).
Length = 123
Score = 71.7 bits (168), Expect = 1e-12
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +3
Query: 78 SPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSGAVLIFWLLPALKKSK 257
S S + + C+YGYSL IYIP AI W I ++W+ V++A +SG++L PA+++
Sbjct: 12 SYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDN 71
Query: 258 YFYML--VGSILAFHFLLATGFMLYFFHGP 341
L + +I+ H LL+ G + YFF P
Sbjct: 72 RRVALATIVTIVLLHMLLSVGCLAYFFDAP 101
>BC008755-1|AAH08755.1| 867|Homo sapiens ABCA2 protein protein.
Length = 867
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 TQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSG--AVLIFWLL 236
T +N P+++SLF LYG+S++ + A FW ++ ++F+++ G A + +LL
Sbjct: 299 TSPTNFPAVLSLFLLYGWSITPIMYPASFW-FEVPSSAYVFLIVINLFIGITATVATFLL 357
Query: 237 PALKKSKYFYMLVGSILAFHFLLATGFML 323
+ K +V S L FL+ + L
Sbjct: 358 QLFEHDKDL-KVVNSYLKSCFLIFPNYNL 385
>AL807752-22|CAI12768.1| 2435|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), membertor protein.
Length = 2435
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 TQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSG--AVLIFWLL 236
T +N P+++SLF LYG+S++ + A FW ++ ++F+++ G A + +LL
Sbjct: 1867 TSPTNFPAVLSLFLLYGWSITPIMYPASFW-FEVPSSAYVFLIVINLFIGITATVATFLL 1925
Query: 237 PALKKSKYFYMLVGSILAFHFLLATGFML 323
+ K +V S L FL+ + L
Sbjct: 1926 QLFEHDKDL-KVVNSYLKSCFLIFPNYNL 1953
>AL807752-21|CAI12767.1| 267|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberase) protein.
Length = 267
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 TQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSG--AVLIFWLL 236
T +N P+++SLF LYG+S++ + A FW ++ ++F+++ G A + +LL
Sbjct: 44 TSPTNFPAVLSLFLLYGWSITPIMYPASFW-FEVPSSAYVFLIVINLFIGITATVATFLL 102
Query: 237 PALKKSKYFYMLVGSILAFHFLLATGFML 323
+ K +V S L FL+ + L
Sbjct: 103 QLFEHDKDL-KVVNSYLKSCFLIFPNYNL 130
>AF327705-1|AAK14335.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 TQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSG--AVLIFWLL 236
T +N P+++SLF LYG+S++ + A FW ++ ++F+++ G A + +LL
Sbjct: 1868 TSPTNFPAVLSLFLLYGWSITPIMYPASFW-FEVPSSAYVFLIVINLFIGITATVATFLL 1926
Query: 237 PALKKSKYFYMLVGSILAFHFLLATGFML 323
+ K +V S L FL+ + L
Sbjct: 1927 QLFEHDKDL-KVVNSYLKSCFLIFPNYNL 1954
>AF327657-1|AAK14334.1| 2436|Homo sapiens ABC transporter ABCA2
protein.
Length = 2436
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 TQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSG--AVLIFWLL 236
T +N P+++SLF LYG+S++ + A FW ++ ++F+++ G A + +LL
Sbjct: 1868 TSPTNFPAVLSLFLLYGWSITPIMYPASFW-FEVPSSAYVFLIVINLFIGITATVATFLL 1926
Query: 237 PALKKSKYFYMLVGSILAFHFLLATGFML 323
+ K +V S L FL+ + L
Sbjct: 1927 QLFEHDKDL-KVVNSYLKSCFLIFPNYNL 1954
>AF178941-1|AAG09372.1| 2436|Homo sapiens ATP-binding cassette
sub-family A member 2 protein.
Length = 2436
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 TQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSG--AVLIFWLL 236
T +N P+++SLF LYG+S++ + A FW ++ ++F+++ G A + +LL
Sbjct: 1868 TSPTNFPAVLSLFLLYGWSITPIMYPASFW-FEVPSSAYVFLIVINLFIGITATVATFLL 1926
Query: 237 PALKKSKYFYMLVGSILAFHFLLATGFML 323
+ K +V S L FL+ + L
Sbjct: 1927 QLFEHDKDL-KVVNSYLKSCFLIFPNYNL 1954
>AB177854-1|BAD66832.1| 1440|Homo sapiens KIAA1062 splice variant 1
protein.
Length = 1440
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 TQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSG--AVLIFWLL 236
T +N P+++SLF LYG+S++ + A FW ++ ++F+++ G A + +LL
Sbjct: 1217 TSPTNFPAVLSLFLLYGWSITPIMYPASFW-FEVPSSAYVFLIVINLFIGITATVATFLL 1275
Query: 237 PALKKSKYFYMLVGSILAFHFLLATGFML 323
+ K +V S L FL+ + L
Sbjct: 1276 QLFEHDKDL-KVVNSYLKSCFLIFPNYNL 1303
>AB028985-1|BAA83014.2| 1771|Homo sapiens KIAA1062 protein protein.
Length = 1771
Score = 34.7 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 TQTSNSPSMISLFCLYGYSLSIYIPVAIFWTIQISWLQWLFVLMAAFVSG--AVLIFWLL 236
T +N P+++SLF LYG+S++ + A FW ++ ++F+++ G A + +LL
Sbjct: 1203 TSPTNFPAVLSLFLLYGWSITPIMYPASFW-FEVPSSAYVFLIVINLFIGITATVATFLL 1261
Query: 237 PALKKSKYFYMLVGSILAFHFLLATGFML 323
+ K +V S L FL+ + L
Sbjct: 1262 QLFEHDKDL-KVVNSYLKSCFLIFPNYNL 1289
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,993,978
Number of Sequences: 237096
Number of extensions: 1519995
Number of successful extensions: 3284
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3276
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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