Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5447
         (488 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   0.76 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   7.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.0  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   9.3  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   9.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   9.3  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   9.3  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   9.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.3  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 239 WQQPEYEDCSGDKGSHQ 189
           W   +YEDCSG   +H+
Sbjct: 115 WSFAKYEDCSGIVSAHK 131


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 284 NRSDKHIKIL*FLQSWQQPEYEDCSG 207
           N+  K   +L     W   +YEDCSG
Sbjct: 101 NKKGKGGPLLRPYPDWSFAKYEDCSG 126


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +3

Query: 126 IYIPVAIFWTIQISWL--QWLFVLMAAF-VSGAVLIFWLLPALKKSKYFYML 272
           + +P+ I W I +SW     +  +MA F + G  L  ++L  +   +Y+ ++
Sbjct: 90  LMMPLEIGWAITVSWKAGDVMCRIMAFFRMFGLYLSSFVLVCISMDRYYAVI 141


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 220 SYSGCCQL*RNQSIFICLSDLFLLFISCWQLVLCYTSF 333
           S+ GCC   R           FLLFI   Q+ +   +F
Sbjct: 66  SFFGCCGAIRESHCMTITFASFLLFILLVQIAVAVYAF 103


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 239 WQQPEYEDCSG 207
           W   +Y+DCSG
Sbjct: 110 WSFAKYDDCSG 120


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 238 QL*RNQSIFICLSDLFLLFISCW 306
           Q+   +S+   LS + +LF  CW
Sbjct: 261 QIQSRKSVIKMLSAVVILFFICW 283


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 84  MESLRSASQSHLVHREA*SISRHPTV 7
           M S    SQSHL+  E       PTV
Sbjct: 339 MYSREQYSQSHLISNENRDFQTTPTV 364


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 239 WQQPEYEDCSG 207
           W   +Y+DCSG
Sbjct: 110 WSFAKYDDCSG 120


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 239 WQQPEYEDCSG 207
           W   +Y+DCSG
Sbjct: 110 WSFAKYDDCSG 120


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 239 SFEEIKVFLYACRIYSCFSFLVGNWFYVILL 331
           +F E  + L    ++S FSFL+    Y+++L
Sbjct: 52  TFMEGVIVLAFSGLFSVFSFLILVSSYIVIL 82


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 15  GVLKWTTLPDGQDEIET 65
           GV+ W  +P+G +   T
Sbjct: 66  GVVNWNKIPEGANTTST 82


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 15  GVLKWTTLPDGQDEIET 65
           GV+ W  +P+G +   T
Sbjct: 114 GVVNWNKIPEGANTTST 130


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 15  GVLKWTTLPDGQDEIET 65
           GV+ W  +P+G +   T
Sbjct: 114 GVVNWNKIPEGANTTST 130


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 15  GVLKWTTLPDGQDEIET 65
           GV+ W  +P+G +   T
Sbjct: 114 GVVNWNKIPEGANTTST 130


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 239 WQQPEYEDCSG 207
           W    Y+DCSG
Sbjct: 114 WSWANYKDCSG 124


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 239 WQQPEYEDCSG 207
           W    Y+DCSG
Sbjct: 114 WSWANYKDCSG 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,383
Number of Sequences: 438
Number of extensions: 2883
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)