Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5444
         (490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    26   0.19 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.00 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.00 
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   1.3  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.0  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   5.3  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   5.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.3  

>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 402 SPAAISAAPDLPTTESPASACGLI 473
           SPA  +A P LPT ES  + C  +
Sbjct: 447 SPATTAAPPQLPTEESVDALCNTL 470


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
 Frame = +2

Query: 407 CRYQCSPGLAYDRESRVCMW-ADQVPE 484
           C   C PG+   ++   C W  DQ  E
Sbjct: 449 CSLPCEPGMIKKQQGDTCCWVCDQCEE 475


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
 Frame = +2

Query: 407 CRYQCSPGLAYDRESRVCMW-ADQVPE 484
           C   C PG+   ++   C W  DQ  E
Sbjct: 539 CSLPCEPGMIKKQQGDTCCWVCDQCEE 565


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 343 YGIFPDENKCDVFWNC 390
           YG FP++ K   ++NC
Sbjct: 59  YGEFPEDEKLKCYFNC 74


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
 Frame = +3

Query: 147 HHISCDKYWKCDNGV-----AELKTCGNGL-AFDATDSKYLTE 257
           H  SCD+ W  D G        ++ C   L  FD T  K L +
Sbjct: 134 HADSCDRLWVLDTGTIGIGNTTIQACPYTLNIFDLTSDKLLRQ 176


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 255 ENCDYLHNVECGERTQLRAPNLHSP 329
           E CDY  N+  GE   +  P    P
Sbjct: 40  EECDYYQNLNLGEIYYIYNPRYPLP 64


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 5/19 (26%), Positives = 12/19 (63%)
 Frame = +3

Query: 162 DKYWKCDNGVAELKTCGNG 218
           + YW+C++   +++  G G
Sbjct: 63  ENYWQCNDKKTDIEETGRG 81


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 156 SCDKYWKCDNGVAEL 200
           +CD+ W  D GV ++
Sbjct: 119 ACDRLWGVDTGVDDI 133


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 347 PYSLEQWGVEIGGSKLCPLSALNVVKVVA 261
           P++      EIG   LC +   N+++ +A
Sbjct: 294 PFNGWYMSTEIGSRDLCDVQRYNLLETIA 322


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 188 TVVALPVFVTGDVVRVETEVV 126
           TV+   +FVTG V  V T VV
Sbjct: 57  TVIYAVIFVTGLVGNVSTCVV 77


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 214 LPQVFSSATPLSHFQYLSQEMW 149
           L Q  +   PL+H+   + E+W
Sbjct: 179 LDQYTNPGNPLAHYDQTAIEIW 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,145
Number of Sequences: 438
Number of extensions: 2588
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)