Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5443
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0478 - 3910575-3912989                                           29   2.5  
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472...    27   9.9  

>05_01_0478 - 3910575-3912989
          Length = 804

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/22 (50%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
 Frame = +1

Query: 571 LYYFGILEISG-IPFNIWNKDT 633
           LY +G+L+ISG +  N+W++DT
Sbjct: 276 LYVYGVLDISGQLIINVWSQDT 297


>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
            16547322-16547469,16550080-16550148,16550348-16550509,
            16550625-16550785,16551240-16551324,16552068-16552144,
            16552234-16552441,16555844-16555921,16556463-16556591,
            16556665-16556808,16556893-16557038,16557137-16557293,
            16557391-16557449,16557582-16557741,16557849-16557998,
            16558093-16558229,16558325-16558471,16558556-16558657,
            16558742-16558799,16558895-16558996,16559729-16559766,
            16559868-16559994,16560075-16560245,16560334-16560465,
            16560577-16560686,16560866-16560926,16561031-16561208,
            16561293-16561498,16561590-16561709,16561903-16562001,
            16562152-16562370,16562701-16562840,16563175-16563286,
            16563375-16563425,16563509-16563589,16563683-16563853,
            16563934-16564089,16564174-16564380,16565145-16565215,
            16565315-16565414,16565783-16565839,16566156-16566212,
            16566308-16566388,16566467-16566606,16566641-16566764
          Length = 2041

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 245  DSARFTSFIYFVLEYINLYLHQIRNTHTFHSSQKPY 138
            +S +  SF  F + Y N  L Q  N H F   Q+ Y
Sbjct: 980  ESFKLNSFEQFCINYTNEKLQQHFNQHVFKMEQEEY 1015


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,198,678
Number of Sequences: 37544
Number of extensions: 252859
Number of successful extensions: 426
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)