Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5441
(397 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 29 0.26
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 28 0.46
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 26 1.8
SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyce... 26 1.8
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 26 2.4
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 25 3.2
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 3.2
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 25 4.3
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 25 4.3
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 4.3
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 25 5.6
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 25 5.6
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 24 7.4
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 24 7.4
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 24 9.8
SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein Pvg5|Schizos... 24 9.8
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 24 9.8
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 24 9.8
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 24 9.8
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 29.1 bits (62), Expect = 0.26
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 82 VPGDSTINRIVTCTGTTILSSRNMLYDYPAVRRDET--VVDDYHGTKIKDPYRWLEDPDS 255
+P +T +R + +S +YD PA + + T V+D++ T+I D E+ DS
Sbjct: 3 IPDSTTDSRHSLSSAALSSASFENIYD-PARKNESTNDVIDNHTDTEIDDHDNDHENLDS 61
Query: 256 NETKEFVEAQNK 291
N E EA N+
Sbjct: 62 NNNNENNEAFNE 73
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 28.3 bits (60), Expect = 0.46
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = +1
Query: 37 PSIHHHLHTIKRPVYVPGDSTI----NRIVTCTGTTILSSRNMLY--DYPAVRRDETVVD 198
P IH H+ +KR + VPG + N ++ G T + D+ R ++ V +
Sbjct: 351 PPIHSHMRKVKRDLPVPGSKIVIPANNYLLAAPGLTATEEEYFTHATDFDPKRWNDRVNE 410
Query: 199 DYHGTKIKDPY 231
D + +I Y
Sbjct: 411 DENAEQIDYGY 421
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 26.2 bits (55), Expect = 1.8
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 88 GDSTINRIVTCTGTTILSSRNMLYDYPAVRRDE--TVVDDYHGTKIKD 225
GD TIN TC T R+MLY V R+ + D+ H + K+
Sbjct: 273 GDVTINPDATCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKE 320
>SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 498
Score = 26.2 bits (55), Expect = 1.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 229 YRWLEDPDSNETKEFVEAQNKITRPYLDA 315
++ LE N KE+++ I PY DA
Sbjct: 56 FKQLESTSKNNAKEYMKLSKVIVHPYKDA 84
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 2.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 31 NTPSIHHHLHTIKRPVYVP--GDSTINRIVTCTGTTILSSRNMLYDYPAVRRDE 186
NT + + + + P Y GD++I+ + G IL + LYDY A +E
Sbjct: 572 NTKATGNTSNRLSLPAYPTDGGDTSIDNPTSTDGQRILGYVSALYDYDAAIPEE 625
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 25.4 bits (53), Expect = 3.2
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 181 DETVVDDYHGTKIKDPY---RWLEDPDSNETKEFVE 279
D+ +D Y DP +WLE+P++ E KE +E
Sbjct: 376 DDRYIDVYAHPIGADPVLVDKWLENPETLEVKEVLE 411
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 25.4 bits (53), Expect = 3.2
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 145 RNMLYD-YPAVRRDETVVDDYHGTKIKDPYRW 237
RN L + Y A++ +E +V + H T++ Y W
Sbjct: 717 RNFLSEIYKAIKENEIIVAEEHDTELSFLYIW 748
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 25.0 bits (52), Expect = 4.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 55 LHTIKRPVYVPGDSTINRIVTCTGTTI 135
+ T+K P + + NR+V C G T+
Sbjct: 829 VQTVKVPTFPSDNCETNRVVICWGATL 855
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 4.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 362 FHSSVSLSLIDFCTGHASKYGRVILF*ASTNSLVSFESGSSSQ 234
+HS+++ S F G +SK + A+ + VSF S+S+
Sbjct: 158 YHSNLATSSNPFSDGSSSKSASLTASSAAASPTVSFSPASTSE 200
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.0 bits (52), Expect = 4.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 163 YPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKE 270
YPA + T VDD + + KD D D N++ E
Sbjct: 21 YPAENGEGTNVDDNNNEEEKDGIPLDNDNDENDSSE 56
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 24.6 bits (51), Expect = 5.6
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 121 TGTTILSSRNMLYDYPAVRRDETVVDDYHG 210
T TT+ + P+V+R ++ +D+HG
Sbjct: 599 TITTVHKKHGSVDHLPSVKRRRSIANDFHG 628
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 24.6 bits (51), Expect = 5.6
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 92 SPGTYTGLLIVCK*WCMLGVFFI 24
S +++GL+IVC W ++ +I
Sbjct: 585 SKSSFSGLIIVCLIWILVAAIYI 607
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 24.2 bits (50), Expect = 7.4
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 208 GTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDACPVQKSINERLTELWNYPKYSCPL 387
G + D + +PDS E + + R L P+Q + LTELWN + P
Sbjct: 436 GYCVLDEGHKIRNPDS-EISISCKQIRTVNRIILSGTPIQNN----LTELWNLFDFVFPG 490
Query: 388 RKG 396
R G
Sbjct: 491 RLG 493
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 24.2 bits (50), Expect = 7.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 229 YRWLEDPDSNETKEFVEAQNKIT 297
Y WL P+S + E E QNKI+
Sbjct: 329 YVWLILPESLDVSESKEQQNKIS 351
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 23.8 bits (49), Expect = 9.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 397 CPSSRGMNI*GSSTVPSASR*SISARDTRLNT 302
CPS + S+ +PSA +S R T NT
Sbjct: 56 CPSDNIVESLSSNEIPSAESEYLSTRSTITNT 87
>SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein
Pvg5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 23.8 bits (49), Expect = 9.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 348 QPLVDRFLHGTRV*IRTRYLVLS 280
+P+ D++L TRV +RYL LS
Sbjct: 195 RPIPDKYLVSTRVLSDSRYLELS 217
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 23.8 bits (49), Expect = 9.8
Identities = 9/39 (23%), Positives = 23/39 (58%)
Frame = -2
Query: 306 IRTRYLVLSLDEFFGFIRIWIFEPTVWIFDLSSMIVVDD 190
+RT +++ +L+E + + +I T W + +++V D+
Sbjct: 140 LRTPFIINALEEPYDYDEEYIISMTDWYYTPFNILVPDE 178
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 23.8 bits (49), Expect = 9.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 288 VLSLDEFFGFIRIWIFEPTVWIFDLSS 208
+L EFF + WI W +DL +
Sbjct: 511 LLDRSEFFTNVSHWIIGSDAWAYDLGN 537
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 23.8 bits (49), Expect = 9.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 232 RWLEDPDSNETKEFV 276
+W+E P SNE EFV
Sbjct: 75 KWIEAPCSNEDVEFV 89
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,691,517
Number of Sequences: 5004
Number of extensions: 33912
Number of successful extensions: 134
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 132093910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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