Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5441
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical pr... 29 1.2
U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical pr... 28 2.1
AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase p... 28 2.1
Z77659-6|CAB01167.1| 401|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 4.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 4.9
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 27 4.9
AF125964-8|AAD14756.1| 214|Caenorhabditis elegans Hypothetical ... 26 8.5
>Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical
protein R13.2 protein.
Length = 205
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +1
Query: 163 YPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDACPVQKSINE 342
Y + + D + D G+K P ++P + K + N RPY P+
Sbjct: 42 YESQQSDSSSSVDESGSKTSSPTSMQQNPSQDGRKNRKKGTNLYGRPYCPGRPLSMEERT 101
Query: 343 RLTELWN 363
R+ +L N
Sbjct: 102 RIIQLHN 108
>U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical
protein F22D3.6 protein.
Length = 639
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 124 GTTILSSRNMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKI 294
G T+ S L DE +H + P RW+ DP+ TKE E K+
Sbjct: 66 GQTVGSLLARLQFLSRTYEDEFDSIQFHLRRKFKPLRWIPDPEQQVTKEIDEGNIKL 122
>AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase
protein.
Length = 639
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 124 GTTILSSRNMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKI 294
G T+ S L DE +H + P RW+ DP+ TKE E K+
Sbjct: 66 GQTVGSLLARLQFLSRTYEDEFDSIQFHLRRKFKPLRWIPDPEQQVTKEIDEGNIKL 122
>Z77659-6|CAB01167.1| 401|Caenorhabditis elegans Hypothetical
protein F23B12.6 protein.
Length = 401
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +1
Query: 148 NMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDACP 321
N Y +R ET++ + + + + +P++ D D E F + YL CP
Sbjct: 21 NFTYSSTEQKRIETMLFENYNSLVLEPFKTTSDEDLAELTIFRQKHASYLLRYLKNCP 78
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 394 PSSRGMNI*GSSTVPSASR*SISARDTRLNTDALSCSEP 278
PS GSST PS S S S+ +TD+ S SEP
Sbjct: 530 PSGSSTEPSGSSTEPSGSSDSSSSELPNSSTDSGSTSEP 568
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 394 PSSRGMNI*GSSTVPSASR*SISARDTRLNTDALSCSEP 278
PS GSST PS S S S+ +TD+ S SEP
Sbjct: 530 PSGSSTEPSGSSTEPSGSSDSSSSELPNSSTDSGSTSEP 568
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 394 PSSRGMNI*GSSTVPSASR*SISARDTRLNTDALSCSEP 278
PS GSST PS S S S+ +TD+ S SEP
Sbjct: 530 PSGSSTEPSGSSTEPSGSSDSSSSELPNSSTDSGSTSEP 568
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1
Query: 394 PSSRGMNI*GSSTVPSASR*SISARDTRLNTDALSCSEP 278
PS GSST PS S S S+ +TD+ S SEP
Sbjct: 530 PSGSSTEPSGSSTEPSGSSDSSSSELPNSSTDSGSTSEP 568
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 27.1 bits (57), Expect = 4.9
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 37 PSIHHHLHTIKRPVYVPGDSTINRIVTCT-GTTILSSRNMLYDYPAVRRDETVVDDYHGT 213
P H LH P Y P ++ +N TC T+ + Y A+ + +D HG
Sbjct: 679 PKDIHDLHN-DFPFY-PQNTKVNNQKTCKLMNTLFDKEKYVIHYKALIK---ALD--HGL 731
Query: 214 KIKDPYRWLEDPDSNETKEFV 276
K+K YR L +SN K ++
Sbjct: 732 KLKKVYRILTFDESNWMKGYI 752
>AF125964-8|AAD14756.1| 214|Caenorhabditis elegans Hypothetical
protein W03G1.8 protein.
Length = 214
Score = 26.2 bits (55), Expect = 8.5
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +1
Query: 196 DDYHGTKIKDPYRWLEDPDSN---ETKEFVEAQNKITR----PYLDACPVQKSINERLTE 354
+DY KI +R +EDPD F E Q+ + P+L P K E L +
Sbjct: 39 EDYTFHKIAQTFR-VEDPDRICIILIDGFSEFQDSLCEEPGFPHLSFAPELKKDIESLRK 97
Query: 355 LWNYPK 372
+WN P+
Sbjct: 98 IWNLPE 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,169,407
Number of Sequences: 27780
Number of extensions: 181143
Number of successful extensions: 489
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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