Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5433
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0561 - 15476484-15476649,15476814-15476893,15476971-154770... 57 7e-09
06_01_0079 - 633595-633985,634346-634543,634864-635036,635355-63... 38 0.005
11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228,530... 37 0.008
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368... 30 0.93
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 29 1.6
12_01_0519 - 4102251-4102352,4102522-4103439,4104763-4104837 29 2.1
11_01_0307 + 2304500-2306023 28 3.7
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 3.7
07_03_0488 + 18674465-18674873,18675343-18675520,18675932-186760... 28 5.0
03_05_0865 - 28365430-28367640 28 5.0
01_01_0897 + 7070539-7071522,7071949-7072620 28 5.0
06_01_0267 - 1972988-1973148,1973275-1973403,1973881-1974024,197... 27 6.5
05_07_0059 + 27402365-27402733,27402848-27402982,27403070-274031... 27 6.5
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 27 8.7
03_06_0345 - 33281126-33281783,33281872-33282063,33282175-332822... 27 8.7
01_06_0273 + 28073759-28074387,28074885-28075428,28076240-28076401 27 8.7
>05_03_0561 -
15476484-15476649,15476814-15476893,15476971-15477030,
15477117-15477210,15477287-15477421,15477601-15477656,
15478359-15478460,15478544-15478651,15479206-15479283,
15479432-15479521,15480061-15480123
Length = 343
Score = 57.2 bits (132), Expect = 7e-09
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Frame = +3
Query: 48 QMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNR-------DRESDG 206
++K++ ++GF + + Y V+++N Q++ + L + + D + G
Sbjct: 21 KIKLLFQTGFDEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVISPDNQEIG 80
Query: 207 KMVFDVIQRMEDTEPFSEELLAAMKRLWADSGVQECFGRSNEYQLNDSAKYFLDDLRPVR 386
+ + D+ R+ D ++EL+ +KRLW D +QE + R + QL D A+YF+++L +
Sbjct: 81 EKLSDIDGRL-DYPLLNKELVLDVKRLWQDPAIQETYLRGSILQLPDCAQYFMENLDRLA 139
Query: 387 SKG 395
G
Sbjct: 140 EAG 142
Score = 34.7 bits (76), Expect = 0.043
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 376 DRLGAKDYQPTEQDILRTRVKTTGIGEVHF 465
DRL Y PT++D+L RV+T G+ ++ F
Sbjct: 136 DRLAEAGYVPTKEDVLYARVRTNGVVQIQF 165
>06_01_0079 -
633595-633985,634346-634543,634864-635036,635355-635599,
635683-635860,636291-636473,636769-636873,637709-637846,
637933-638925
Length = 867
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 3 LLLGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAIL 149
L+LG+ +G STI KQ K+++++ FT E+ + ++ SN + L +L
Sbjct: 458 LILGSPGAGTSTIFKQAKLLYDTRFTQEELDSIKLMIQSNMFKYLGILL 506
>11_01_0656 -
5301048-5301441,5301779-5301976,5302056-5302228,
5302691-5302935,5303014-5303191,5303578-5303760,
5303858-5303962,5304621-5304758,5304846-5305802
Length = 856
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 3 LLLGAGESGKSTIVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAIL 149
LLLG +G STI KQ K ++ + FT E+ + + ++ SN + L +L
Sbjct: 446 LLLGPDGAGTSTIFKQAKYLYGTRFTQEELENIKLIIQSNMFKYLGILL 494
>02_05_0280 +
27435166-27435254,27436348-27436437,27436764-27436866,
27437318-27437377,27437745-27439148,27439227-27439328,
27439424-27439609,27439695-27439820,27439905-27440000,
27440509-27440574
Length = 773
Score = 30.3 bits (65), Expect = 0.93
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 386 EQRITSPPNKIS*GLESKRLESGKYIFSFKTSISNCFDVG 505
E I+ PPNK+ ++S++ +SF++S S+CF VG
Sbjct: 281 ENEISCPPNKLGYCIQSEKP------YSFQSSFSSCFSVG 314
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 340 STTPLNISWTTSDRLGAKDYQPTEQDILR 426
ST PL +TSD +G+K PT +++R
Sbjct: 1517 STDPLTFEVSTSDGVGSKSEMPTTDELIR 1545
>12_01_0519 - 4102251-4102352,4102522-4103439,4104763-4104837
Length = 364
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 39 IVKQMKIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGN 185
++K +K IH+ GFT+E FK + ++ I + R + +L + N
Sbjct: 305 LLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGKSREVRSLTNVVKN 353
>11_01_0307 + 2304500-2306023
Length = 507
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 158 AQLGHHLWQ*RPRKRW*DGVRRDSTDGG 241
A +GH LWQ R R+R G+ ++ T G
Sbjct: 463 AYVGHRLWQRRRRRRRAGGMEQELTSSG 490
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 304 FRSALVVPTSTNSTTPLNISWTTSDRLGAKDYQPTEQDILRT 429
F ++V S + SW +SDR +D +QD+ RT
Sbjct: 740 FAKRILVTKDDKSDVEKDRSWRSSDRTNQRDRDRNDQDVGRT 781
>07_03_0488 +
18674465-18674873,18675343-18675520,18675932-18676072,
18677736-18677856,18678570-18678704,18679380-18679637
Length = 413
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 375 RPVRSKGLPAHRTRYPKD*SQNDWNRGSTFSPSKP 479
+ +R G+ RT+ P+ DWN G + KP
Sbjct: 289 KAMRPNGVKLFRTQSPRHFEGGDWNEGGSCQRDKP 323
>03_05_0865 - 28365430-28367640
Length = 736
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 135 LVAILRAMPNLGIIYGNRDRESDGKMVFDVIQRMEDTEPFSEELLA 272
+V +L AMP+ + N D E D K ++ T P + E LA
Sbjct: 486 VVGVLDAMPSSNLKPENEDEELDAKTIYRTTYMFSATMPPAVERLA 531
>01_01_0897 + 7070539-7071522,7071949-7072620
Length = 551
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 108 VVYSNTIQSLVAILRAMPNLGIIYGNRDRESDGKMVFDVIQRMEDTEPFSEEL 266
+ YSNT+ + +A G G+R RE + VFD R+ TEP E L
Sbjct: 195 IAYSNTVLTRIAFGDESARGGGGGGDRGREL--RKVFDDFARLLGTEPMGELL 245
>06_01_0267 -
1972988-1973148,1973275-1973403,1973881-1974024,
1974368-1974493,1974595-1974720,1975149-1975241,
1975465-1975606,1976747-1976878,1976943-1977080,
1977431-1977523,1978186-1978389,1978568-1978656,
1978839-1978988,1979088-1979253,1979355-1979576,
1979687-1979872,1980289-1980411,1980511-1980611,
1982005-1982155
Length = 891
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 326 GTTKALLNARVGPEPFHRGEKLLTERF 246
GT + L +GP P HRGE T F
Sbjct: 367 GTARTSLVVTIGPSPRHRGETTSTIMF 393
>05_07_0059 + 27402365-27402733,27402848-27402982,27403070-27403183,
27403297-27403449,27403544-27403644,27403945-27404041,
27404542-27404651,27404775-27404878,27405129-27405308,
27405398-27405741,27405841-27405905,27405981-27406450,
27406939-27407793,27408045-27408116,27408475-27408575,
27409069-27409170,27409295-27409456,27409665-27411230,
27411384-27411602,27413924-27414198,27414291-27414596,
27414727-27415012,27415085-27415087,27415162-27415416,
27415537-27415803
Length = 2236
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 386 PNRSEVVQEIFSGVVELVLVGTTKALLNARVGPEPFHRGEKLLTERFRVL 237
PN + I VEL+ + ++NA VG +P + EKL +E ++
Sbjct: 1909 PNMKADKEGIVQRRVELMAKEGVQFIVNAHVGSDPLYSVEKLRSENDAII 1958
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 311 LLNARVGPEPFHRG 270
+LNA + PEP HRG
Sbjct: 815 ILNANIAPEPLHRG 828
>03_06_0345 -
33281126-33281783,33281872-33282063,33282175-33282217,
33282751-33282874,33282966-33283058,33284484-33284685,
33284751-33284857,33285462-33285543,33285629-33285666,
33285751-33285837,33286324-33286434,33286554-33286904
Length = 695
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 312 TPERQSRPRAFSSRREAPH*TVPCPPSVESRRTPS 208
TP R PRA +SR + P P PP E R P+
Sbjct: 35 TPRRTRLPRACNSRPKVPP-PPPPPPRQERARPPA 68
>01_06_0273 + 28073759-28074387,28074885-28075428,28076240-28076401
Length = 444
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 188 SIAIDDAQVGHGTQDGDERLDRIAVDHGP 102
SI +DD HG++ DE++D ++ P
Sbjct: 239 SIILDDGNSSHGSKSEDEKVDLGSITESP 267
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,036,098
Number of Sequences: 37544
Number of extensions: 335034
Number of successful extensions: 969
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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