Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5432
         (384 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023492-1|AAY84892.1|  405|Drosophila melanogaster RE20268p pro...    30   0.90 
AE014297-355|AAF51953.1|  405|Drosophila melanogaster CG2051-PB,...    30   0.90 
AE014297-354|AAN14322.1|  405|Drosophila melanogaster CG2051-PA,...    30   0.90 
BT023747-1|AAZ41755.1| 1122|Drosophila melanogaster SD25546p pro...    28   4.8  
AE014297-3489|AAF56254.1| 1122|Drosophila melanogaster CG5524-PA...    28   4.8  
AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p pro...    27   8.4  
AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-P...    27   8.4  

>BT023492-1|AAY84892.1|  405|Drosophila melanogaster RE20268p
           protein.
          Length = 405

 Score = 30.3 bits (65), Expect = 0.90
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 19  HTNAPDVLSFRPRRLLYEKLMRVKFYDARAP*HKINRMKLPTKSLITIRPT 171
           +TN  D   +RP RL  +K +   +Y       K+ R K+ T+ L    PT
Sbjct: 326 YTNVKDEKEYRPYRLEVKKRLNAVYYKQLKDLKKMERFKMDTEMLRARLPT 376


>AE014297-355|AAF51953.1|  405|Drosophila melanogaster CG2051-PB,
           isoform B protein.
          Length = 405

 Score = 30.3 bits (65), Expect = 0.90
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 19  HTNAPDVLSFRPRRLLYEKLMRVKFYDARAP*HKINRMKLPTKSLITIRPT 171
           +TN  D   +RP RL  +K +   +Y       K+ R K+ T+ L    PT
Sbjct: 326 YTNVKDEKEYRPYRLEVKKRLNAVYYKQLKDLKKMERFKMDTEMLRARLPT 376


>AE014297-354|AAN14322.1|  405|Drosophila melanogaster CG2051-PA,
           isoform A protein.
          Length = 405

 Score = 30.3 bits (65), Expect = 0.90
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 19  HTNAPDVLSFRPRRLLYEKLMRVKFYDARAP*HKINRMKLPTKSLITIRPT 171
           +TN  D   +RP RL  +K +   +Y       K+ R K+ T+ L    PT
Sbjct: 326 YTNVKDEKEYRPYRLEVKKRLNAVYYKQLKDLKKMERFKMDTEMLRARLPT 376


>BT023747-1|AAZ41755.1| 1122|Drosophila melanogaster SD25546p
           protein.
          Length = 1122

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 107 HRDTKLTE*SCPLNRSLQYDRRNLASLNIAAGELSEPYRELPNLYDVKKRDVQ 265
           HR T+L        R+L+   + L +L+  AGE+    R L   Y+   R  Q
Sbjct: 825 HRQTELESTEAEERRALEGINKKLTALDTEAGEVESKMRSLDLHYEENTRRFQ 877


>AE014297-3489|AAF56254.1| 1122|Drosophila melanogaster CG5524-PA
           protein.
          Length = 1122

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 107 HRDTKLTE*SCPLNRSLQYDRRNLASLNIAAGELSEPYRELPNLYDVKKRDVQ 265
           HR T+L        R+L+   + L +L+  AGE+    R L   Y+   R  Q
Sbjct: 825 HRQTELESTEAEERRALEGINKKLTALDTEAGEVESKMRSLDLHYEENTRRFQ 877


>AY113238-1|AAM29243.1| 1566|Drosophila melanogaster AT11515p
           protein.
          Length = 1566

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 143 LNRSLQYDRRNLASLNIAAGELSEPYRELPNLYD 244
           +N+S++  RR   SL    G+L  PY    N YD
Sbjct: 3   INKSIRGSRRTRRSLASGGGDLIGPYIYCINFYD 36


>AE014134-2480|AAF53382.2| 1566|Drosophila melanogaster CG15287-PA
           protein.
          Length = 1566

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 143 LNRSLQYDRRNLASLNIAAGELSEPYRELPNLYD 244
           +N+S++  RR   SL    G+L  PY    N YD
Sbjct: 3   INKSIRGSRRTRRSLASGGGDLIGPYIYCINFYD 36


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,287,975
Number of Sequences: 53049
Number of extensions: 279155
Number of successful extensions: 470
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)