Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5431
(344 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 28 6.8
Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl transf... 28 9.0
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 28 9.0
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 28 9.0
BC115394-1|AAI15395.1| 1076|Homo sapiens glutamate receptor inte... 28 9.0
BC115393-1|AAI15394.1| 1076|Homo sapiens glutamate receptor inte... 28 9.0
BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan rece... 28 9.0
BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan rece... 28 9.0
BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan rece... 28 9.0
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 28 9.0
AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-l... 28 9.0
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 28 9.0
AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan rece... 28 9.0
AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan rece... 28 9.0
AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase p... 28 9.0
AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase p... 28 9.0
AJ133439-1|CAB39895.1| 849|Homo sapiens GRIP1 protein protein. 28 9.0
AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein. 28 9.0
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 28 9.0
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 148 GRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN 285
G D++G FSFCA + L ++ A NV + V S N
Sbjct: 131 GSFAGDIWGEIDTRFSFCAVATFALLGKLDAINVEKAIEFVLSCMN 176
>Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 331
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 148 GRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN 285
G D++G FSFCA + L ++ A NV + V S N
Sbjct: 131 GSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 148 GRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN 285
G D++G FSFCA + L ++ A NV + V S N
Sbjct: 131 GSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 148 GRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN 285
G D++G FSFCA + L ++ A NV + V S N
Sbjct: 131 GSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
>BC115394-1|AAI15395.1| 1076|Homo sapiens glutamate receptor
interacting protein 1 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 142 WIGRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN*SYADIGL 309
W G + +G SF A+G + R+ LSPV+ P + +Y D+GL
Sbjct: 757 WDGSAIDTSYGTEGT--SFQASGYNFNTYDWRSPKQRGSLSPVTKPRSQTYPDVGL 810
>BC115393-1|AAI15394.1| 1076|Homo sapiens glutamate receptor
interacting protein 1 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 142 WIGRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN*SYADIGL 309
W G + +G SF A+G + R+ LSPV+ P + +Y D+GL
Sbjct: 757 WDGSAIDTSYGTEGT--SFQASGYNFNTYDWRSPKQRGSLSPVTKPRSQTYPDVGL 810
>BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 205 AGSDHALARVRASNVHAGLSPVSSPTN*SYAD 300
+G ALARV +S++ GLS +++ T+ +YA+
Sbjct: 112 SGEAEALARVYSSSISNGLSNLNNETSGTYAN 143
>BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 205 AGSDHALARVRASNVHAGLSPVSSPTN*SYAD 300
+G ALARV +S++ GLS +++ T+ +YA+
Sbjct: 112 SGEAEALARVYSSSISNGLSNLNNETSGTYAN 143
>BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 205 AGSDHALARVRASNVHAGLSPVSSPTN*SYAD 300
+G ALARV +S++ GLS +++ T+ +YA+
Sbjct: 112 SGEAEALARVYSSSISNGLSNLNNETSGTYAN 143
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 148 GRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN 285
G D++G FSFCA + L ++ A NV + V S N
Sbjct: 131 GSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
>AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-like
5 (cholinesterase-related cell division controller)
protein.
Length = 1512
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = -2
Query: 214 PILRHRMKSSXTSPQTRHFGSSRSTNGAFRYLKHRSSFSSKPSLATKGSTSKLTLRHNPL 35
P+LR KS SP + SRS + R SS S PS T S+ L N
Sbjct: 401 PVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSIS--PSTLTLKSSLAAELNKNKK 458
Query: 34 SFLAE 20
+ AE
Sbjct: 459 ARAAE 463
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 148 GRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN 285
G D++G FSFCA + L ++ A NV + V S N
Sbjct: 131 GSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
>AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 205 AGSDHALARVRASNVHAGLSPVSSPTN*SYAD 300
+G ALARV +S++ GLS +++ T+ +YA+
Sbjct: 112 SGEAEALARVYSSSISNGLSNLNNETSGTYAN 143
>AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 205 AGSDHALARVRASNVHAGLSPVSSPTN*SYAD 300
+G ALARV +S++ GLS +++ T+ +YA+
Sbjct: 112 SGEAEALARVYSSSISNGLSNLNNETSGTYAN 143
>AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1452
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = -2
Query: 214 PILRHRMKSSXTSPQTRHFGSSRSTNGAFRYLKHRSSFSSKPSLATKGSTSKLTLRHNPL 35
P+LR KS SP + SRS + R SS S PS T S+ L N
Sbjct: 401 PVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSIS--PSTLTLKSSLAAELNKNKK 458
Query: 34 SFLAE 20
+ AE
Sbjct: 459 ARAAE 463
>AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1512
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = -2
Query: 214 PILRHRMKSSXTSPQTRHFGSSRSTNGAFRYLKHRSSFSSKPSLATKGSTSKLTLRHNPL 35
P+LR KS SP + SRS + R SS S PS T S+ L N
Sbjct: 401 PVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSIS--PSTLTLKSSLAAELNKNKK 458
Query: 34 SFLAE 20
+ AE
Sbjct: 459 ARAAE 463
>AJ133439-1|CAB39895.1| 849|Homo sapiens GRIP1 protein protein.
Length = 849
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 142 WIGRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN*SYADIGL 309
W G + +G SF A+G + R+ LSPV+ P + +Y D+GL
Sbjct: 545 WDGSAIDTSYGTEGT--SFQASGYNFNTYDWRSPKQRGSLSPVTKPRSQTYPDVGL 598
>AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein.
Length = 784
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = -2
Query: 214 PILRHRMKSSXTSPQTRHFGSSRSTNGAFRYLKHRSSFSSKPSLATKGSTSKLTLRHNPL 35
P+LR KS SP + SRS + R SS S PS T S+ L N
Sbjct: 401 PVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSIS--PSTLTLKSSLAAELNKNKK 458
Query: 34 SFLAE 20
+ AE
Sbjct: 459 ARAAE 463
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 148 GRIRNDVFGATSXCFSFCAAGSDHALARVRASNVHAGLSPVSSPTN 285
G D++G FSFCA + L ++ A NV + V S N
Sbjct: 131 GSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMN 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,158,402
Number of Sequences: 237096
Number of extensions: 807442
Number of successful extensions: 1608
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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