Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5426
         (383 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   131   3e-31
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   131   3e-31
Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   128   2e-30
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   128   2e-30
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   128   2e-30
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   128   2e-30
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   128   2e-30
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   124   3e-29
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    32   0.22 
AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro...    27   6.3  
AY069273-1|AAL39418.1|  421|Drosophila melanogaster GM10003p pro...    27   6.3  
AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ...    27   6.3  
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,...    27   6.3  
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,...    27   6.3  

>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  131 bits (317), Expect = 3e-31
 Identities = 58/72 (80%), Positives = 61/72 (84%)
 Frame = +3

Query: 42  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 221
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 222 YGSNKKTRPYAP 257
           YGSNK+TR   P
Sbjct: 72  YGSNKRTRHMLP 83



 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 235 RRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHG 351
           +R  HMLP GF+K LVHNV+ELE+L+MQNR +C EIAHG
Sbjct: 76  KRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHG 114


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  131 bits (317), Expect = 3e-31
 Identities = 58/72 (80%), Positives = 61/72 (84%)
 Frame = +3

Query: 42  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 221
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 222 YGSNKKTRPYAP 257
           YGSNK+TR   P
Sbjct: 72  YGSNKRTRHMLP 83



 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 235 RRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHG 351
           +R  HMLP GF+K LVHNV+ELE+L+MQNR +C EIAHG
Sbjct: 76  KRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHG 114


>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  128 bits (309), Expect = 2e-30
 Identities = 57/70 (81%), Positives = 59/70 (84%)
 Frame = +3

Query: 48  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 227
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 228 SNKKTRPYAP 257
           SNK+TR   P
Sbjct: 61  SNKRTRHMLP 70



 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 235 RRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHG 351
           +R  HMLP GF+K LVHNV+ELE+L+MQNR +C EIAHG
Sbjct: 63  KRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHG 101


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  128 bits (309), Expect = 2e-30
 Identities = 57/70 (81%), Positives = 59/70 (84%)
 Frame = +3

Query: 48  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 227
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 228 SNKKTRPYAP 257
           SNK+TR   P
Sbjct: 61  SNKRTRHMLP 70



 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 235 RRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHG 351
           +R  HMLP GF+K LVHNV+ELE+L+MQNR +C EIAHG
Sbjct: 63  KRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHG 101


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  128 bits (309), Expect = 2e-30
 Identities = 57/70 (81%), Positives = 59/70 (84%)
 Frame = +3

Query: 48  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 227
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 228 SNKKTRPYAP 257
           SNK+TR   P
Sbjct: 61  SNKRTRHMLP 70



 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 235 RRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHG 351
           +R  HMLP GF+K LVHNV+ELE+L+MQNR +C EIAHG
Sbjct: 63  KRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHG 101


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  128 bits (309), Expect = 2e-30
 Identities = 57/70 (81%), Positives = 59/70 (84%)
 Frame = +3

Query: 48  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 227
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 228 SNKKTRPYAP 257
           SNK+TR   P
Sbjct: 61  SNKRTRHMLP 70



 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 235 RRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHG 351
           +R  HMLP GF+K LVHNV+ELE+L+MQNR +C EIAHG
Sbjct: 63  KRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHG 101


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  128 bits (309), Expect = 2e-30
 Identities = 57/70 (81%), Positives = 59/70 (84%)
 Frame = +3

Query: 48  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 227
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 228 SNKKTRPYAP 257
           SNK+TR   P
Sbjct: 61  SNKRTRHMLP 70



 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +1

Query: 235 RRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHG 351
           +R  HMLP GF+K LVHNV+ELE+L+MQNR +C EIAHG
Sbjct: 63  KRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHG 101


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  124 bits (300), Expect = 3e-29
 Identities = 56/70 (80%), Positives = 58/70 (82%)
 Frame = +3

Query: 48  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 227
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRV RRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60

Query: 228 SNKKTRPYAP 257
           SNK+TR   P
Sbjct: 61  SNKRTRHMLP 70



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = +1

Query: 235 RRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHGWPFPRSRK 375
           +R  HMLP GF+K LVHNV+ELE+L+MQN +   E+    P PRS++
Sbjct: 63  KRTRHMLPTGFKKFLVHNVRELEVLLMQNPRLLREMPTASP-PRSKE 108


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +2

Query: 164 Y*QQSPQAVQGSILDAQHWLRFQQEDP 244
           Y QQS   +QG++ DAQH LR +Q  P
Sbjct: 7   YRQQSASPLQGTVSDAQHRLRIEQAHP 33


>AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p
           protein.
          Length = 1019

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 39  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 152
           T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 841 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 878


>AY069273-1|AAL39418.1|  421|Drosophila melanogaster GM10003p
           protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 39  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 152
           T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 243 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 280


>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
            protein.
          Length = 2422

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 39   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 152
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2244 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2281


>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
            isoform D protein.
          Length = 2431

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 39   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 152
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2253 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2290


>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
            isoform C protein.
          Length = 2410

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 39   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 152
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2232 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,952,793
Number of Sequences: 53049
Number of extensions: 365833
Number of successful extensions: 959
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)