Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5426
         (383 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    83   9e-17
Z72506-4|CAA96619.1|  590|Caenorhabditis elegans Hypothetical pr...    28   2.6  
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ...    28   2.6  
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related...    28   2.6  
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    27   6.0  
AL132860-27|CAB60521.1|  365|Caenorhabditis elegans Hypothetical...    27   6.0  
AC006620-4|AAF39778.1|  305|Caenorhabditis elegans Hypothetical ...    27   6.0  
AC024763-9|AAU20836.1|  404|Caenorhabditis elegans Hypothetical ...    26   7.9  
AC024763-8|AAK93863.1|  480|Caenorhabditis elegans Hypothetical ...    26   7.9  

>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 82.6 bits (195), Expect = 9e-17
 Identities = 34/60 (56%), Positives = 47/60 (78%)
 Frame = +3

Query: 78  IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRPYAP 257
           +VKK+  +F RH+SDRY ++  +WRKP+GIDNRVRRRF+G   MP IG+GS+++TR   P
Sbjct: 11  VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRRTRFVLP 70



 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = +1

Query: 211 PTLVTVPTRRPVHMLPNGFRKVLVHNVKELEILMMQNRKHCAEIAHG 351
           PT+     RR   +LPNG++KVLV NVK+L++L+MQ+ K+  EI HG
Sbjct: 55  PTIGHGSDRRTRFVLPNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHG 101


>Z72506-4|CAA96619.1|  590|Caenorhabditis elegans Hypothetical
           protein F07A5.3 protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 213 NIGYG-SNKKTRPYAPKWIP*GPSSQC*RAGNLDDAK 320
           N+G+   N + R Y P W    P  QC ++G++D +K
Sbjct: 348 NVGFRYRNIEKRNYFPDWPKCPPKGQCHQSGSIDCSK 384


>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
           repeats, ras-likedomain, kinase protein 1 protein.
          Length = 2395

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +1

Query: 136 LRGIGVNLEVLTTESAGGSRVNT*CPTLVTVPTRRPVHMLPNGFRKVLVH----NVKELE 303
           LR   ++L  +T      +R+NT    L  +P+ R +++  N  RK+ +     +   LE
Sbjct: 525 LRTTRLSLAAITRVDLSDNRLNTFPSILFQMPSLRSLNLADNSIRKIEIPTYYISSTSLE 584

Query: 304 ILMMQNRK-HCAEIAHGWPFPRSRKPD 381
           IL ++N +  C  I      P+ ++ D
Sbjct: 585 ILNLRNNQLECIAIQFLSSLPQLQQLD 611


>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
           kinase protein.
          Length = 2393

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = +1

Query: 136 LRGIGVNLEVLTTESAGGSRVNT*CPTLVTVPTRRPVHMLPNGFRKVLVH----NVKELE 303
           LR   ++L  +T      +R+NT    L  +P+ R +++  N  RK+ +     +   LE
Sbjct: 523 LRTTRLSLAAITRVDLSDNRLNTFPSILFQMPSLRSLNLADNSIRKIEIPTYYISSTSLE 582

Query: 304 ILMMQNRK-HCAEIAHGWPFPRSRKPD 381
           IL ++N +  C  I      P+ ++ D
Sbjct: 583 ILNLRNNQLECIAIQFLSSLPQLQQLD 609


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
            K07G5.3 protein.
          Length = 1202

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = -1

Query: 191  EPPADSVVN-TSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLVCFF*KRD-- 21
            E P +S+   T R++ +P  +++ +R+  ++ ++  FD+ R       HLV     R+  
Sbjct: 1058 EEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLVAARQLREIL 1117

Query: 20   SEPRG 6
              PRG
Sbjct: 1118 ENPRG 1122


>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 44  QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 148
           QD  K   + D+RQKE  E Y+  IGS+ +  E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 33  KETYKMAIRPVYRPTIVKKRTKR-FIRHQSDRYDKLKRNWRKPRGIDNRVRRR 188
           K+ +  A++P +R TI+ +R K   ++   DRY K K+ + K   +    +RR
Sbjct: 387 KKKHMTALKP-WRDTILIERGKMPKLKKIRDRYIKQKKKFNKENRLSKECKRR 438


>AL132860-27|CAB60521.1|  365|Caenorhabditis elegans Hypothetical
           protein Y56A3A.33 protein.
          Length = 365

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +3

Query: 138 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRPYAPKWIP 269
           K++W  P     +  R  KG YL P+    + K    +  KW P
Sbjct: 81  KKDWAAPNDFYRKCSRCSKGFYLNPDGTANAQKCVYHHRAKWDP 124


>AC006620-4|AAF39778.1|  305|Caenorhabditis elegans Hypothetical
           protein C51G7.1 protein.
          Length = 305

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +3

Query: 138 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRPYAPKWIP 269
           K++W  P     +  R  KG YL P+    + K    +  KW P
Sbjct: 44  KKDWAAPNDFYRKCSRCSKGFYLNPDGTANAQKCVYHHRAKWDP 87


>AC024763-9|AAU20836.1|  404|Caenorhabditis elegans Hypothetical
           protein Y39A3CL.7b protein.
          Length = 404

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 51  AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRR 185
           A RP  +P   K+R  RF+   S R+++     R P  + +R  R
Sbjct: 295 AERPA-KPNKEKERGDRFLPEPSRRFNRFNHRNRSPPSLSSRTSR 338


>AC024763-8|AAK93863.1|  480|Caenorhabditis elegans Hypothetical
           protein Y39A3CL.7a protein.
          Length = 480

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 51  AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRR 185
           A RP  +P   K+R  RF+   S R+++     R P  + +R  R
Sbjct: 371 AERPA-KPNKEKERGDRFLPEPSRRFNRFNHRNRSPPSLSSRTSR 414


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,076,041
Number of Sequences: 27780
Number of extensions: 179086
Number of successful extensions: 479
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)