Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5409
         (301 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   1.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    22   5.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           21   7.6  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 154 ITDSPDPLTVLLGTSSTGH 210
           + DSP P T+L   +S+G+
Sbjct: 531 MNDSPSPTTILTSVNSSGN 549


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 110 LHFYFYGATIFNFNYLRIFTVIFLIFFYCIDVWTSS 3
           L  Y +GAT  N N LR F +   I       W ++
Sbjct: 358 LERYRHGATQLNINLLRHFLLQLTIVAVLFAHWLTT 393


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 207  SPSSPNPSLAAKGSTSKLTHRH 272
            SP+SP PS  +K   S    RH
Sbjct: 1462 SPASPTPSKKSKRHQSASPIRH 1483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,967
Number of Sequences: 2352
Number of extensions: 3845
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)