Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5408
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.5  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   9.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   9.9  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 517 EPTHSVKIVSSRGLKNVYREL 579
           E TH VKIV   G+ +  REL
Sbjct: 290 EGTHYVKIVYYLGIPSEAREL 310


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 517 EPTHSVKIVSSRGLKNVYREL 579
           E TH VKIV   G+ +  REL
Sbjct: 305 EGTHYVKIVYYLGIPSEAREL 325


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 142 LIMSYIILPIKIVNDAA 192
           L+ SYI++ + + ND+A
Sbjct: 74  LVSSYIVILVNLRNDSA 90


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 80  GSEWRENIGGEKIFKDYTVHI 18
           G EW++N+        Y +H+
Sbjct: 91  GKEWKKNLNLRDSVTKYLIHL 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,809
Number of Sequences: 438
Number of extensions: 4388
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)