Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5407
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 264 3e-71
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 238 2e-63
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 238 2e-63
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 100 8e-22
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 96 2e-20
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 95 5e-20
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 95 5e-20
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 71 6e-13
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 64 6e-11
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 58 4e-09
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 38 0.008
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 38 0.008
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 38 0.008
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 38 0.008
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 38 0.008
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 36 0.020
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 36 0.034
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 36 0.034
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 34 0.079
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 34 0.079
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 34 0.079
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 34 0.079
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 33 0.14
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 33 0.14
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 32 0.42
AF063007-2|AAC16433.1| 583|Caenorhabditis elegans Hypothetical ... 32 0.42
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 32 0.42
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 31 0.73
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 31 0.73
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 29 2.2
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 29 2.2
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 29 3.9
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 29 3.9
Z81069-4|CAB02991.1| 370|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 27 9.1
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 27 9.1
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 264 bits (648), Expect = 3e-71
Identities = 133/188 (70%), Positives = 148/188 (78%)
Frame = +3
Query: 99 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 278
R Y+ TK+++ Q VA+KSQN+RRLQAQRNELN KVRML+ GSYVGEV K M
Sbjct: 31 RKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAM 90
Query: 279 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 458
DKKKVLVKVHPEGK+VVD+DK++DIN + RVALR +SY LHK+LPNKVDPLVSLMMV
Sbjct: 91 DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMV 150
Query: 459 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLL 638
EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF LG+ K G KTLL
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF-DALGIAQPKGVLLFGPPGTGKTLL 209
Query: 639 ARAVAHHT 662
ARAVAHHT
Sbjct: 210 ARAVAHHT 217
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 238 bits (583), Expect = 2e-63
Identities = 120/188 (63%), Positives = 143/188 (76%)
Frame = +3
Query: 99 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 278
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 26 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85
Query: 279 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 458
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 86 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 145
Query: 459 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLL 638
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF LG+ K G KTLL
Sbjct: 146 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELF-DALGIAQPKGVLLYGPPGTGKTLL 204
Query: 639 ARAVAHHT 662
ARAVAHHT
Sbjct: 205 ARAVAHHT 212
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 238 bits (583), Expect = 2e-63
Identities = 120/188 (63%), Positives = 143/188 (76%)
Frame = +3
Query: 99 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 278
RPY+ TK+E+ + VAEKS N+RRL AQ+ ELN KVR+L+ GS+VGEV K M
Sbjct: 47 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106
Query: 279 DKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMV 458
DKKKVLVK HP+GK++VD+ +VDI+ + A RVALR ++Y +H++LP+KVDPLVSLMMV
Sbjct: 107 DKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMV 166
Query: 459 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLL 638
EKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELF LG+ K G KTLL
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELF-DALGIAQPKGVLLYGPPGTGKTLL 225
Query: 639 ARAVAHHT 662
ARAVAHHT
Sbjct: 226 ARAVAHHT 233
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 100 bits (240), Expect = 8e-22
Identities = 65/185 (35%), Positives = 100/185 (54%), Gaps = 3/185 (1%)
Frame = +3
Query: 117 KIEELQLIVAEKSQNLRRLQAQ---RNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKK 287
+I++ L+ E QN RL+ Q + E AKV LR VG + + +D +
Sbjct: 70 RIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMA-------VGSLEEIIDDQ 122
Query: 288 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 467
+V + + V++ VD + C V L ++++ + +L + DP+VS+M +EK
Sbjct: 123 HAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKA 182
Query: 468 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARA 647
P TY VGGLD+QI+EIKE +ELP+ HPE + +G+R K G KTLLA+A
Sbjct: 183 PQETYADVGGLDQQIQEIKEAVELPLTHPEYY-EEMGIRPPKGVILYGCPGTGKTLLAKA 241
Query: 648 VAHHT 662
VA+ T
Sbjct: 242 VANQT 246
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/125 (41%), Positives = 71/125 (56%)
Frame = +3
Query: 288 KVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKV 467
+ L+ V KFVVDL +V D+ RV + Y +H LP K+DP V++M VE+
Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171
Query: 468 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARA 647
PD TY VGG QI++++EV+E P+ HPE + LG+ K G KTL ARA
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERY-VNLGIEPPKGVLLYGPPGTGKTLCARA 230
Query: 648 VAHHT 662
VA+ T
Sbjct: 231 VANRT 235
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 94.7 bits (225), Expect = 5e-20
Identities = 57/166 (34%), Positives = 92/166 (55%)
Frame = +3
Query: 156 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 335
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 33 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 92
Query: 336 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 515
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 93 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 152
Query: 516 EIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVA 653
E++EV+ELP+ +PELF +G+ K G KTLLARAVA
Sbjct: 153 ELREVVELPLINPELF-KRVGITPPKGCLLFGPPGTGKTLLARAVA 197
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIISSCCRS 655
GI PKG LL+GPPGTGK +++ S
Sbjct: 172 GITPPKGCLLFGPPGTGKTLLARAVAS 198
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 94.7 bits (225), Expect = 5e-20
Identities = 57/166 (34%), Positives = 92/166 (55%)
Frame = +3
Query: 156 QNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 335
Q L+ L+ + +E+ + G VGEV+K + ++K +VK ++VV
Sbjct: 41 QKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGC 100
Query: 336 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 515
++++ ++ RV+L + T+ + LP +VDPLV M E + +Y VGGL +QI+
Sbjct: 101 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIR 160
Query: 516 EIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVA 653
E++EV+ELP+ +PELF +G+ K G KTLLARAVA
Sbjct: 161 ELREVVELPLINPELF-KRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIISSCCRS 655
GI PKG LL+GPPGTGK +++ S
Sbjct: 180 GITPPKGCLLFGPPGTGKTLLARAVAS 206
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 71.3 bits (167), Expect = 6e-13
Identities = 40/136 (29%), Positives = 72/136 (52%)
Frame = +3
Query: 255 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 434
+G+ ++ +D+ +V + V + +D + C VAL S L +LP + D
Sbjct: 85 IGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEAD 144
Query: 435 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGL 614
+ ++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +G+ + G
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELY-QQIGIDPPRGVLMYGP 203
Query: 615 RALEKTLLARAVAHHT 662
KT+LA+AVA +T
Sbjct: 204 PGCGKTMLAKAVAANT 219
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 64.5 bits (150), Expect = 6e-11
Identities = 39/126 (30%), Positives = 63/126 (50%)
Frame = +3
Query: 285 KKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEK 464
K ++K + + + VD +++ V + +SY + + LP + D V M V++
Sbjct: 111 KCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDE 170
Query: 465 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLAR 644
P Y +GG DKQI+E+ E + LP+ H + F LG+ K G KT++AR
Sbjct: 171 RPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRF-VNLGIHPPKGVLMYGPPGTGKTMMAR 229
Query: 645 AVAHHT 662
AVA T
Sbjct: 230 AVAAQT 235
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 62.5 bits (145), Expect = 3e-10
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +3
Query: 414 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQK 593
+L +K+D VEK P T++ +GG + QI+E+KE +ELP+ HPE + +G+ K
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYY-EEMGITAPK 218
Query: 594 ESYCMGLRALEKTLLARAVAHHT 662
G KTLLA+AVA+ T
Sbjct: 219 GVILYGEPGTGKTLLAKAVANST 241
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/78 (39%), Positives = 49/78 (62%)
Frame = +3
Query: 432 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMG 611
DP+ E + D Y+ +GG+ KQ+ +IKE++ELP++HP+LF +G++ + G
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLF-KAIGIKPPRGILLFG 251
Query: 612 LRALEKTLLARAVAHHTG 665
KTL+ARAVA+ TG
Sbjct: 252 PPGTGKTLIARAVANETG 269
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +3
Query: 345 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 518
+D+ D + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 436 IDLEDDQIDAEV-LNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 494
Query: 519 IKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++E+++ PV+HPE + G++ + G KTLLA+A+A+
Sbjct: 495 LQELVQYPVEHPEKY-LKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 539
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +3
Query: 432 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMG 611
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF +G++ + G
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLF-KAIGVKPPRGILLFG 250
Query: 612 LRALEKTLLARAVAHHTG 665
KTL+ARAVA+ TG
Sbjct: 251 PPGTGKTLIARAVANETG 268
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +3
Query: 345 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 518
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 519 IKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++E+++ PV+HPE + G++ + G KTLLA+A+A+
Sbjct: 494 LQELVQYPVEHPEKY-LKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 538
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +3
Query: 432 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMG 611
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF +G++ + G
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLF-KAIGVKPPRGILLFG 250
Query: 612 LRALEKTLLARAVAHHTG 665
KTL+ARAVA+ TG
Sbjct: 251 PPGTGKTLIARAVANETG 268
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +3
Query: 345 VDINDVTANCRVALRNESYTLH--KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 518
+D+ D T + V L + + T+ + K P V + P++T+ +GGL +E
Sbjct: 435 IDLEDDTIDAEV-LNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRE 493
Query: 519 IKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++E+++ PV+HPE + G++ + G KTLLA+A+A+
Sbjct: 494 LQELVQYPVEHPEKY-LKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 538
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +2
Query: 581 AQPKGVLLYGPPGTGKDIISSCCRS 655
A PKGVLL+GPPGTGK +I C S
Sbjct: 347 APPKGVLLFGPPGTGKTMIGRCVAS 371
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 489 VGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCM-GLRALEKTLLARAVA 653
V GL+ K ++E++ LP K P++F G+R + + G KT++ R VA
Sbjct: 318 VAGLEGAKKALREIVVLPFKRPDVF---TGIRAPPKGVLLFGPPGTGKTMIGRCVA 370
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 560 VLMPFGIAQPKGVLLYGPPGTGKDIIS 640
V F I PKGV+ YGPPGTGK +++
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVA 442
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++ VGGL I+ +KEV+ P+ +PE+F + K G KTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVF-EKFRINPPKGVVFYGPPGTGKTLVARALAN 447
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 560 VLMPFGIAQPKGVLLYGPPGTGKDIIS 640
V F I PKGV+ YGPPGTGK +++
Sbjct: 414 VFEKFRINPPKGVVFYGPPGTGKTLVA 440
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++ VGGL I+ +KEV+ P+ +PE+F + K G KTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVF-EKFRINPPKGVVFYGPPGTGKTLVARALAN 445
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 560 VLMPFGIAQPKGVLLYGPPGTGKDIIS 640
V F I PKGV+ YGPPGTGK +++
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVA 442
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++ VGGL I+ +KEV+ P+ +PE+F + K G KTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVF-EKFRINPPKGVVFYGPPGTGKTLVARALAN 447
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 560 VLMPFGIAQPKGVLLYGPPGTGKDIIS 640
V F I PKGV+ YGPPGTGK +++
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVA 442
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++ VGGL I+ +KEV+ P+ +PE+F + K G KTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVF-EKFRINPPKGVVFYGPPGTGKTLVARALAN 447
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 560 VLMPFGIAQPKGVLLYGPPGTGKDIIS 640
V F I PKGV+ YGPPGTGK +++
Sbjct: 414 VFEKFRINPPKGVVFYGPPGTGKTLVA 440
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++ VGGL I+ +KEV+ P+ +PE+F + K G KTL+ARA+A+
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVF-EKFRINPPKGVVFYGPPGTGKTLVARALAN 445
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 560 VLMPFGIAQPKGVLLYGPPGTGKDIIS 640
V F I PKGV+ YGPPGTGK +++
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVA 442
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++ VGGL I+ +KEV+ P+ +PE+F + K G KTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVF-EKFRINPPKGVVFYGPPGTGKTLVARALAN 447
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 560 VLMPFGIAQPKGVLLYGPPGTGKDIIS 640
V F I PKGV+ YGPPGTGK +++
Sbjct: 416 VFEKFRINPPKGVVFYGPPGTGKTLVA 442
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAH 656
++ VGGL I+ +KEV+ P+ +PE+F + K G KTL+ARA+A+
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVF-EKFRINPPKGVVFYGPPGTGKTLVARALAN 447
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 572 FGIAQPKGVLLYGPPGTGKDIISSCCRS 655
FGI P G+LLYGPPG K +I+ S
Sbjct: 488 FGIDPPAGILLYGPPGCSKTLIARALAS 515
Score = 35.5 bits (78), Expect = 0.034
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 426 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYC 605
++ P + +VP+ ++ +GG ++ EI++ + P KHPE F G+
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAF-ERFGIDPPAGILL 498
Query: 606 MGLRALEKTLLARAVA 653
G KTL+ARA+A
Sbjct: 499 YGPPGCSKTLIARALA 514
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 465 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCM-GLRALEKTLLA 641
VPD +++ +G L + K+++ I P+K + F LG+ + + + G KTLLA
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDF-AALGIDCRPQGILLCGPPGCGKTLLA 585
Query: 642 RAVAHHTG 665
+AVA+ TG
Sbjct: 586 KAVANETG 593
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 584 QPKGVLLYGPPGTGKDIIS 640
+P+G+LL GPPG GK +++
Sbjct: 567 RPQGILLCGPPGCGKTLLA 585
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIIS 640
G+ P+G +++GPPG GK + +
Sbjct: 235 GVDPPRGFIVHGPPGCGKTMFA 256
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 35.5 bits (78), Expect = 0.034
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 465 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCM-GLRALEKTLLA 641
VPD +++ +G L + K+++ I P+K + F LG+ + + + G KTLLA
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDF-AALGIDCRPQGILLCGPPGCGKTLLA 585
Query: 642 RAVAHHTG 665
+AVA+ TG
Sbjct: 586 KAVANETG 593
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 584 QPKGVLLYGPPGTGKDIIS 640
+P+G+LL GPPG GK +++
Sbjct: 567 RPQGILLCGPPGCGKTLLA 585
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIIS 640
G+ P+G +++GPPG GK + +
Sbjct: 235 GVDPPRGFIVHGPPGCGKTMFA 256
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.079
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +2
Query: 578 IAQPKGVLLYGPPGTGKDIIS 640
++ P+G+LLYGPPG GK +++
Sbjct: 111 LSPPRGILLYGPPGCGKTLLA 131
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAHH 659
++ +GG ++ + E+K+ I LP++ L L + G KTLLA+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHL-LSPPRGILLYGPPGCGKTLLAKAVARA 137
Query: 660 TG 665
G
Sbjct: 138 AG 139
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 34.3 bits (75), Expect = 0.079
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +2
Query: 578 IAQPKGVLLYGPPGTGKDIIS 640
++ P+G+LLYGPPG GK +++
Sbjct: 114 LSPPRGILLYGPPGCGKTLLA 134
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 480 YEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVAHH 659
++ +GG ++ + E+K+ I LP++ L L + G KTLLA+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHL-LSPPRGILLYGPPGCGKTLLAKAVARA 140
Query: 660 TG 665
G
Sbjct: 141 AG 142
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 34.3 bits (75), Expect = 0.079
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 587 PKGVLLYGPPGTGKDIIS 640
PKGVLL GPPGTGK +++
Sbjct: 234 PKGVLLVGPPGTGKTLLA 251
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 498 LDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARAVA 653
+D+ E++E+++ +K PE + LG R K +G KTLLARA+A
Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKY-SRLGGRLPKGVLLVGPPGTGKTLLARAIA 255
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 34.3 bits (75), Expect = 0.079
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 432 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCM- 608
D L +++EK P+ + + GL+ + +KE + LP+K P+LF G R + +
Sbjct: 102 DKLSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLF---TGNRKPWQGILLF 157
Query: 609 GLRALEKTLLARAVAHHTG 665
G K+ +A+AVA G
Sbjct: 158 GPPGTGKSYIAKAVATEAG 176
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 590 KGVLLYGPPGTGKDIIS 640
+G+LL+GPPGTGK I+
Sbjct: 152 QGILLFGPPGTGKSYIA 168
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +2
Query: 575 GIAQP-KGVLLYGPPGTGKDIIS 640
G+ QP KG+LL+GPPG GK +++
Sbjct: 206 GLRQPVKGILLFGPPGNGKTLLA 228
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 551 PRAVLMPFGIAQPKGVLLYGPPGTGKDIIS 640
P + G+ +G+LL+GPPGTGK +++
Sbjct: 318 PPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 551 PRAVLMPFGIAQPKGVLLYGPPGTGKDIIS 640
P + G+ +G+LL+GPPGTGK +++
Sbjct: 318 PPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 551 PRAVLMPFGIAQPKGVLLYGPPGTGKDIIS 640
P + G+ +G+LL+GPPGTGK +++
Sbjct: 252 PPEFIEQLGMKHVRGILLFGPPGTGKTLMA 281
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +3
Query: 477 TYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARA 647
T E VGG+ +Q K +++VI P K+P+LF +G+ K G KTLLA A
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLF-ESVGVPVSKGILLHGPSGCGKTLLANA 781
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +3
Query: 477 TYEMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARA 647
T E VGG+ +Q K +++VI P K+P+LF +G+ K G KTLLA A
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLF-ESVGVPVSKGILLHGPSGCGKTLLANA 781
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 483 EMVGGLDKQIKEIKEVIELPVKHPELF*CPLGLRNQKESYCMGLRALEKTLLARA 647
E VGG+ +Q K +++VI P K+P+LF +G+ K G KTLLA A
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLF-ESVGVPVSKGILLHGPSGCGKTLLANA 55
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIISS 643
G+ KG+LL+GP G GK ++++
Sbjct: 32 GVPVSKGILLHGPSGCGKTLLAN 54
>AF063007-2|AAC16433.1| 583|Caenorhabditis elegans Hypothetical
protein R119.7 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 604 Q*DSFWLRNPKGHQNSSGCFTG 539
Q S+ NP+GH+NS+GCF G
Sbjct: 125 QASSYLPPNPRGHRNSTGCFNG 146
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIIS 640
G PKG +L GPPGTGK +++
Sbjct: 322 GAKIPKGAILTGPPGTGKTLLA 343
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIISSCCRS 655
G+ +G L YGPPGTGK S S
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALAS 219
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIISSCCRS 655
G+ +G L YGPPGTGK S S
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALAS 265
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 258 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 344
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 258 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 344
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIIS 640
G P+G LL GPPG GK +++
Sbjct: 314 GAKLPRGALLTGPPGCGKTLLA 335
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 575 GIAQPKGVLLYGPPGTGKDIIS 640
G P+G LL GPPG GK +++
Sbjct: 314 GAKLPRGALLTGPPGCGKTLLA 335
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 575 GIAQP-KGVLLYGPPGTGKDIISSCCRS 655
G+ P K ++L GPPGTGK +I+ S
Sbjct: 221 GLRSPWKAMVLAGPPGTGKTLIARAIAS 248
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 575 GIAQP-KGVLLYGPPGTGKDIISSCCRS 655
G+ P K ++L GPPGTGK +I+ S
Sbjct: 221 GLRSPWKAMVLAGPPGTGKTLIARAIAS 248
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 575 GIAQP-KGVLLYGPPGTGKDIISSCCRS 655
G+ P K ++L GPPGTGK +I+ S
Sbjct: 221 GLRSPWKAMVLAGPPGTGKTLIARAIAS 248
>Z81069-4|CAB02991.1| 370|Caenorhabditis elegans Hypothetical
protein F25H9.4 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2
Query: 194 EFITLGLKTTKI-LRFFGDNEL*LFNLGYVVRAKTLTLHRVHFHFSRESHIALLTLM 27
E IT G KT K+ L DN L+NL YV + T H F F+ E+ + +++++
Sbjct: 203 ELITDG-KTVKVCLALLADNSPILYNLFYVEKPGQTTFH--IFDFTYEAILGMVSIL 256
>Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical
protein T08G11.4 protein.
Length = 566
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 354 NDVTANCRVALRNESYTLHK-ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEV 530
N++T C V HK IL N ++ M+EK P+ST+E + K K IK+
Sbjct: 155 NELTKQCEVMKPIYPIDQHKDILENPDYQQITKTMIEKNPESTFEDI--YTKHCKLIKKQ 212
Query: 531 IE 536
E
Sbjct: 213 SE 214
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 590 KGVLLYGPPGTGKDIIS 640
+ V+ YGPPGTGK + +
Sbjct: 343 RNVMFYGPPGTGKTLFA 359
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 324 VVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 503
V++ D N+++ + ANC + N T + V P++ EK P +V +D
Sbjct: 351 VLEKDANINVAALAANCITGIANGLRTKFQPFAVSVTPIIFEKFKEKKPTLRDPLVACID 410
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 386 KSDTTIGRDIVNINVLV*IDDEFTFRMNFYEDLLFIHWFNHFSDVRSLFLQEL 228
K D + D+ N+L DE TF ++ D IH N D+ LFL L
Sbjct: 272 KRDVMVHGDLWAANILWKEKDEGTFSVSKVIDYQLIHMGNPAEDLVRLFLSTL 324
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 324 VVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLD 503
V++ D N+++ + ANC + N T + V P++ EK P +V +D
Sbjct: 351 VLEKDANINVAALAANCITGIANGLRTKFQPFAVSVTPIIFEKFKEKKPTLRDPLVACID 410
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,558,678
Number of Sequences: 27780
Number of extensions: 292526
Number of successful extensions: 992
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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