Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5402
(355 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 1.2
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 29 1.2
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 29 1.2
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 29 1.2
U29096-2|AAX88830.1| 133|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z79759-1|CAB02138.2| 841|Caenorhabditis elegans Hypothetical pr... 27 3.8
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 27 5.0
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 27 5.0
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 26 6.6
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 26 6.6
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 26 8.7
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 26 8.7
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 26 8.7
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 181 KNWYPPAGFEHRWIASTRMHRTSYPVRPRP 270
+NW A F WIA ++ +TS P RP P
Sbjct: 381 QNW---ATFGEEWIAPVQLAKTSAPARPPP 407
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 181 KNWYPPAGFEHRWIASTRMHRTSYPVRPRP 270
+NW A F WIA ++ +TS P RP P
Sbjct: 381 QNW---ATFGEEWIAPVQLAKTSAPARPPP 407
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 35 CPTLQTETHYCFTTNYANHNFAGLIFITRCYSF-TVEVNREHLLSTYFIRKIG 190
C T++C T HNF F+T SF + + L++ + IG
Sbjct: 605 CQNCNNNTYWCLRTKNETHNFLYCEFVTEFISFYDFNTDPDQLINAVYSLDIG 657
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 181 KNWYPPAGFEHRWIASTRMHRTSYPVRPRP 270
+NW A F WIA ++ +TS P RP P
Sbjct: 381 QNW---ATFGEEWIAPVQLAKTSAPARPPP 407
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 181 KNWYPPAGFEHRWIASTRMHRTSYPVRPRP 270
+NW A F WIA ++ +TS P RP P
Sbjct: 381 QNW---ATFGEEWIAPVQLAKTSAPARPPP 407
>U29096-2|AAX88830.1| 133|Caenorhabditis elegans Hypothetical
protein F30H5.5 protein.
Length = 133
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 247 TSGAFVLKRSTG-VRIPQAGTNFSNEIRTQQMFTIDFHGEGI 125
TS A +L+ + ++ Q T NE T+Q+FT+D++ I
Sbjct: 23 TSDAEILEITNAHIKAIQVATRSMNETATRQLFTLDYNNPKI 64
>Z79759-1|CAB02138.2| 841|Caenorhabditis elegans Hypothetical
protein ZK858.1 protein.
Length = 841
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 154 TFVE-YVFH*KNWYPPAGFEHRWIASTRMHRTSYPVRPRP 270
TF+E + F+ ++ PP+ + A + HR ++P R RP
Sbjct: 602 TFIEKFHFNGYSYPPPSRYAAGTAAPSHKHRNAHPQRQRP 641
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +2
Query: 20 YSYNGCPTLQT---ETHYCFTTNYANHNFAGLI-FITRCYSFTVEVNRE 154
+S CP Q ET T +GLI F +RCYS T+E N +
Sbjct: 303 FSNTPCPVPQEQYLETRMRCETAQQPSCLSGLIQFDSRCYSMTIETNEK 351
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +2
Query: 20 YSYNGCPTLQT---ETHYCFTTNYANHNFAGLI-FITRCYSFTVEVNRE 154
+S CP Q ET T +GLI F +RCYS T+E N +
Sbjct: 303 FSNTPCPVPQEQYLETRMRCETAQQPSCLSGLIQFDSRCYSMTIETNEK 351
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 3 SSKVSSIVTTAALPFRPKRITASP-LIT 83
SSK + TT +P P+RIT+ P LIT
Sbjct: 176 SSKTTINTTTTRIPSTPRRITSVPGLIT 203
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 3 SSKVSSIVTTAALPFRPKRITASP-LIT 83
SSK + TT +P P+RIT+ P LIT
Sbjct: 176 SSKTTINTTTTRIPSTPRRITSVPGLIT 203
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 238 AFVLKRSTGVRIPQAGTNFSNEIRTQQMFTI 146
AFV+ R TGV P F E R ++ T+
Sbjct: 919 AFVIDRQTGVLTPSPHVVFDRETRPREDVTV 949
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 238 AFVLKRSTGVRIPQAGTNFSNEIRTQQMFTI 146
AFV+ R TGV P F E R ++ T+
Sbjct: 919 AFVIDRQTGVLTPSPHVVFDRETRPREDVTV 949
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 238 AFVLKRSTGVRIPQAGTNFSNEIRTQQMFTI 146
AFV+ R TGV P F E R ++ T+
Sbjct: 919 AFVIDRQTGVLTPSPHVVFDRETRPREDVTV 949
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 238 AFVLKRSTGVRIPQAGTNFSNEIRTQQMFTI 146
AFV+ R TGV P F E R ++ T+
Sbjct: 919 AFVIDRQTGVLTPSPHVVFDRETRPREDVTV 949
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,686,116
Number of Sequences: 27780
Number of extensions: 152146
Number of successful extensions: 246
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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