Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5401
(343 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical pr... 33 0.071
Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z92786-6|CAB07208.1| 569|Caenorhabditis elegans Hypothetical pr... 27 3.5
AL023828-26|CAA19455.2| 431|Caenorhabditis elegans Hypothetical... 27 3.5
AL023828-12|CAA19456.1| 492|Caenorhabditis elegans Hypothetical... 27 3.5
Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z48006-4|CAA88048.1| 429|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z83317-3|CAB05897.1| 217|Caenorhabditis elegans Hypothetical pr... 26 6.1
U13019-5|AAC24444.1| 994|Caenorhabditis elegans Hypothetical pr... 26 6.1
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 26 6.1
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 26 8.1
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 26 8.1
>U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical
protein M01H9.2 protein.
Length = 439
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 151 PLRCSKSSAQLKPLSKYTKVRPFTMGTRNMVSAST 255
P C K A+LKP SK TK P T RN + ST
Sbjct: 78 PRLCGKCYAKLKPDSKRTKTIPVTQFKRNPAATST 112
>Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical
protein F47H4.4 protein.
Length = 518
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 191 CQNIQKSGPSQWERETWYPQVQRGPS 268
C+ + K+ WE E WY +++ G S
Sbjct: 185 CETVGKNAVKYWEFEYWYQKIKAGDS 210
>Z81481-7|CAB63437.3| 511|Caenorhabditis elegans Hypothetical
protein C38D9.6 protein.
Length = 511
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 191 CQNIQKSGPSQWERETWYPQVQRGPS 268
C+ + K+ WE E WY +++ G S
Sbjct: 176 CETVGKNAVKYWEFEYWYQKIKAGDS 201
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 114 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALHNGN 230
T Y+T V STV++ Q + I +A IYK ++GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 114 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALHNGN 230
T Y+T V STV++ Q + I +A IYK ++GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 114 TTYRTSVTCRLSTVALQQKFSTIKAAVKIYKSQALHNGN 230
T Y+T V STV++ Q + I +A IYK ++GN
Sbjct: 380 TNYKTLVVIIRSTVSMNQNLNAISSA--IYKELTSNDGN 416
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 123 RTSVTCRLSTVALQQKFSTIKAAVKIYKSQALHN 224
R S+ LS +ALQ FST K A + + LHN
Sbjct: 2505 RVSIADELSNIALQYTFST-KNATETIDTTVLHN 2537
>Z92786-6|CAB07208.1| 569|Caenorhabditis elegans Hypothetical
protein F47H4.9 protein.
Length = 569
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 191 CQNIQKSGPSQWERETWYPQVQRGPS 268
C + K+ WE E WY +++ G S
Sbjct: 235 CDTVGKNVVKYWEFEHWYQKIEAGDS 260
>AL023828-26|CAA19455.2| 431|Caenorhabditis elegans Hypothetical
protein Y17G7B.10a protein.
Length = 431
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 200 YFDSGFNCAELLLQRNGGKTTCYG 129
Y++ G N A++L Q++ G T C G
Sbjct: 278 YYEIGINDAQMLKQKSSGITICTG 301
>AL023828-12|CAA19456.1| 492|Caenorhabditis elegans Hypothetical
protein Y17G7B.10b protein.
Length = 492
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 200 YFDSGFNCAELLLQRNGGKTTCYG 129
Y++ G N A++L Q++ G T C G
Sbjct: 339 YYEIGINDAQMLKQKSSGITICTG 362
>Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical
protein F32A11.1 protein.
Length = 319
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 206 KSGPSQWERETWYPQVQRGPS 268
+ G WER+TW VQ PS
Sbjct: 225 RRGVGVWERDTWVESVQSYPS 245
>Z48006-4|CAA88048.1| 429|Caenorhabditis elegans Hypothetical
protein F19C6.3 protein.
Length = 429
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -2
Query: 264 GPRCTC--GYHVSRSHCEGPDFCIF*Q 190
GP+C+C G+ + ++CE D C F Q
Sbjct: 359 GPKCSCDTGFQGNGTYCEDIDECSFSQ 385
>Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical
protein Y57G11B.7 protein.
Length = 215
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 254 VLADTMFLVPIVKGLTFVYFDSGFN 180
++ TMFL P+ G T VYF G++
Sbjct: 189 IICATMFLHPLSMGSTNVYFVPGYH 213
>Z83317-3|CAB05897.1| 217|Caenorhabditis elegans Hypothetical
protein F13G11.2 protein.
Length = 217
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 254 VLADTMFLVPIVKGLTFVYFDSGFN 180
++ TMFL P+ G T VYF G++
Sbjct: 191 IICATMFLHPLSMGSTNVYFVPGYH 215
>U13019-5|AAC24444.1| 994|Caenorhabditis elegans Hypothetical
protein T12A2.5 protein.
Length = 994
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +3
Query: 30 ENKAFREL----EEMAAANIFRSAFRGLLRRSTTYRTSVTCRLSTVAL 161
EN+ F+ + + + NIF+ F G L+ +++ S+ RL++ L
Sbjct: 130 ENRLFKSMGDADQTVRMLNIFKKGFEGTLKIDSSFNPSIIHRLASSQL 177
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 26.2 bits (55), Expect = 6.1
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 335 VNFGHKVEGQAVLYFFIRSKVEGRAPAVLADTMFLVPIVKGLTFV--YFDSGFNCAELLL 162
V G+ ++G+ + RS+VE +AP ++ P+V G+ V G EL++
Sbjct: 102 VVLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELII 161
Query: 161 -QRNGGKT 141
R GKT
Sbjct: 162 GDRQTGKT 169
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 25.8 bits (54), Expect = 8.1
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -3
Query: 326 GHKVEGQAVLYFFIRSKVEGRAPAVLADTMFLVPIVKGLTFV--YFDSGFNCAELLL-QR 156
G+ ++G+ + RS+VE +AP ++ P+V G+ V G EL++ R
Sbjct: 113 GNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDR 172
Query: 155 NGGKT 141
GKT
Sbjct: 173 QTGKT 177
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 25.8 bits (54), Expect = 8.1
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -3
Query: 326 GHKVEGQAVLYFFIRSKVEGRAPAVLADTMFLVPIVKGLTFV--YFDSGFNCAELLL-QR 156
G+ ++G+ + RS+VE +AP ++ P+V G+ V G EL++ R
Sbjct: 140 GNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDR 199
Query: 155 NGGKT 141
GKT
Sbjct: 200 QTGKT 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,060,128
Number of Sequences: 27780
Number of extensions: 155810
Number of successful extensions: 547
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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