Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5393
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0850 + 21050164-21050189,21050874-21050979,21051186-210512...    30   1.9  
07_03_0179 + 14801037-14801108,14801325-14802788                       30   1.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   2.4  
07_03_1503 + 27017933-27018063,27019668-27019727,27019996-270201...    29   3.2  
06_02_0111 - 11958372-11958713,11959367-11959633,11959729-119601...    29   4.3  
03_04_0214 + 18688480-18688832,18688956-18688999,18689039-186891...    29   4.3  
11_01_0477 - 3688357-3690042                                           27   9.9  

>10_08_0850 +
           21050164-21050189,21050874-21050979,21051186-21051257,
           21051775-21051828,21052077-21052184,21052653-21052802,
           21052914-21053258,21053361-21054801,21054844-21055675,
           21057060-21057325,21057530-21059603,21060172-21060442,
           21060556-21060990
          Length = 2059

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 396 DSLSSQSPLHNVLVCMLGQH 337
           D  SS  PLH+++VC L QH
Sbjct: 599 DIFSSPGPLHDIIVCWLDQH 618


>07_03_0179 + 14801037-14801108,14801325-14802788
          Length = 511

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 181 NFQTGFVETLTPQYTPGQSITSPQPVPSSVEDKLA 77
           N + G + T  P +    S+T P P+P  +E+ +A
Sbjct: 321 NLKIGRIATSVPVFQSTNSLTEPLPIPEPIEEVMA 355


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 181 NFQTGFVETLTPQYTPGQSITSPQPVPSS 95
           N QT F  T TP +     ITSP P P +
Sbjct: 32  NIQTRFPSTRTPAFATPPPITSPSPSPGT 60


>07_03_1503 +
           27017933-27018063,27019668-27019727,27019996-27020101,
           27020254-27020325,27021008-27021061,27021707-27021856,
           27022206-27022547,27022651-27024684,27024706-27024947,
           27025658-27026235,27026329-27028183,27028533-27028851,
           27028980-27029417
          Length = 2126

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 396 DSLSSQSPLHNVLVCMLGQHVHNN 325
           D   S  PLH+++VC L QH  N+
Sbjct: 611 DIFESPGPLHDIIVCWLDQHEVNS 634


>06_02_0111 -
           11958372-11958713,11959367-11959633,11959729-11960124,
           11961246-11961320
          Length = 359

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 243 EVSLSRFCYLS*SGFMMVEDLGSSSGPN 326
           E +++ FC +S    M + DLG SSGPN
Sbjct: 37  EEAVTAFCGVSVPKSMAIADLGCSSGPN 64


>03_04_0214 +
           18688480-18688832,18688956-18688999,18689039-18689101,
           18689883-18689956,18691526-18692017
          Length = 341

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 181 NFQTGFVETLTPQYTPGQSITSPQPVPSSVEDKLA 77
           N + G + T  P      S+T P PVP  +E+ +A
Sbjct: 269 NLKVGKIVTSVPVLQSTNSLTEPLPVPEPIEEVMA 303


>11_01_0477 - 3688357-3690042
          Length = 561

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 148 PQYTPGQSITSPQPVPSSVEDKLANLQAQQEVSCTVV 38
           P Y  G+  T P P+P  +++K   L  + E    +V
Sbjct: 140 PAYYNGEETTLPSPLPHDLDEKTTGLLRRGEAEADLV 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,367,064
Number of Sequences: 37544
Number of extensions: 343012
Number of successful extensions: 641
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)