Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5391
(610 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1125 + 31085106-31085714 34 0.10
01_07_0047 + 40731508-40731714,40731834-40731893,40731992-407321... 31 0.71
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 30 1.2
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 30 1.6
04_04_1405 - 33305948-33309676,33309749-33310468,33310533-333114... 30 1.6
03_05_0198 + 21890523-21891002 30 1.6
02_03_0116 - 15440263-15441024,15441097-15443451 30 1.6
08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099 29 2.2
07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206 29 2.2
07_01_1157 + 10954619-10954835,10956078-10957114 29 2.2
06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776 29 2.2
05_03_0669 + 16802158-16802495,16802574-16803906,16803970-16804818 29 2.2
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 29 2.2
04_01_0009 - 178579-178638,179151-179246,179504-179565,180181-18... 29 2.2
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 29 2.2
02_03_0347 - 17999780-18000592,18000656-18003019 29 2.2
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 29 2.2
01_06_0717 - 31446860-31447074,31447183-31447270,31448909-314490... 29 2.2
06_03_1296 - 29104857-29105870 28 5.0
02_01_0302 - 2021221-2023305 28 5.0
12_02_0197 + 15392427-15392617,15392743-15393271 28 6.7
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282... 28 6.7
04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220 28 6.7
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 28 6.7
03_06_0581 + 34886728-34886817,34886990-34887175,34887332-348875... 28 6.7
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 28 6.7
11_04_0242 - 15273774-15274043,15274131-15274235 27 8.8
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 27 8.8
>04_04_1125 + 31085106-31085714
Length = 202
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +2
Query: 59 PASTQPDSTQPFAQTIRSAMWTPSLSTPHREMPIPEWVRNPAILP--IARAASNSVPKYP 232
P P + P T WTP +TP P P W PA P A A+ + P P
Sbjct: 43 PCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTP-WTPTPATPPPTPATPATPTTPPTP 101
Query: 233 ADFPA 247
A P+
Sbjct: 102 APAPS 106
>01_07_0047 +
40731508-40731714,40731834-40731893,40731992-40732159,
40732198-40732203,40732898-40732961,40733395-40733690,
40733799-40733903,40734030-40734066,40734309-40734403,
40735226-40735282,40735361-40735438,40735527-40735586
Length = 410
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 98 QTIRSAMWTPSLSTPHREMPIPEWVRNPAI-LPIARAAS 211
+ ++SA + PS STPH P NP I LP+ +A S
Sbjct: 279 EILKSASFAPSASTPHSVFPGQTSTINPGIQLPLKKAVS 317
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 56 WPASTQPDSTQPFAQTIRSAMWTPSLSTPHREMPIPEWVRNPAILPIARAAS 211
+P +T P PF + M P + P P+P NPA +P A AA+
Sbjct: 54 YPPATPPFHRAPFLHYPQDPMAAPHMPRPVISFPMP--TPNPAAIPSAAAAA 103
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A + Y D A CP PY
Sbjct: 732 REVIHPEWLANPVVVPKANSKLRMCIDY-TDLNKA-CPKDPY 771
>04_04_1405 -
33305948-33309676,33309749-33310468,33310533-33311439,
33334405-33334484
Length = 1811
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 641 REVVHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 680
>03_05_0198 + 21890523-21891002
Length = 159
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = -1
Query: 223 GHRIRRSSSDWQDGWVAHPFWYRHFPVGCA*RGRPHRRTDSLGKWLGGVRLGTRG 59
G RIR SSS W++G A + PV A +G+ RR D++ G + TRG
Sbjct: 87 GARIRASSSSWREGAAAAAEGHGSAPV-LARQGKEWRRRDTVVH--GSASVPTRG 138
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 857 RELIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 896
>08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099
Length = 621
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 553 REVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 592
>07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206
Length = 961
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 725 REVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 764
>07_01_1157 + 10954619-10954835,10956078-10957114
Length = 417
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 152 MPIPEWVRNPAILPIARAASNSVPKYP 232
MP P ++ P + P+ +AS+ PKYP
Sbjct: 1 MPFPYFLLAPLLTPLPHSASDPQPKYP 27
>06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776
Length = 833
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 595 REVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 634
>05_03_0669 + 16802158-16802495,16802574-16803906,16803970-16804818
Length = 839
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 629 REVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 668
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 489 REVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 528
>04_01_0009 -
178579-178638,179151-179246,179504-179565,180181-180245,
181271-181363,181489-181592,182070-182153,182223-182303,
182829-182880,183048-183119,183411-183486,183568-183680,
184056-184203,184295-184372,184511-184640,184733-184923,
187039-187099,187201-187371
Length = 578
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +2
Query: 11 EAESCSPSSLWPR*LWPASTQPD----STQPFAQTIRSAMWTPSLSTPHREMPIPEWVRN 178
EA C P P WPA +P + FA RS + TPS+ H + EW
Sbjct: 98 EALHCLPP-YDPSLRWPAGDKPPFLYWKIRDFAHAYRSGITTPSVVAEHIIAGVEEWSNK 156
Query: 179 PAILPI 196
+P+
Sbjct: 157 KPPMPM 162
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 860 REVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 899
>02_03_0347 - 17999780-18000592,18000656-18003019
Length = 1058
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 860 REVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 899
>01_06_1164 -
35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 852 REVIHPEWLANPVVVPKANGKVRMCIDY-TDLNKA-CPKDPY 891
>01_06_0717 -
31446860-31447074,31447183-31447270,31448909-31449012,
31449618-31449745,31450461-31450555,31461823-31463115,
31463188-31464039,31464568-31464621
Length = 942
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
RE+ PEW+ NP ++P A Y D A CP PY
Sbjct: 374 REVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 413
>06_03_1296 - 29104857-29105870
Length = 337
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 430 NTGWVSLCMSKLPPLSFHQSVGTLLKCVTSIHYDSPDMYSAN 555
N GW L M++ PLSF + L+ T H D P + S N
Sbjct: 58 NGGW--LLMAQHKPLSFQDQIVFLVHPSTGTHLDLPVLRSPN 97
>02_01_0302 - 2021221-2023305
Length = 694
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 59 PASTQPDSTQPFAQTIRSAMWTPSLSTPHREMPIPEWVRNPAILPIARAASNSVPKYPAD 238
P S+ P P+ Q S+ TPS +P P P P+ +A+ P
Sbjct: 403 PVSSPPRRRGPYPQPPSSSP-TPSYPSPSSSYPAPPGSNTPSYPSPPSSATTPSSHSPPG 461
Query: 239 FPAALCPNYP 268
++ P+YP
Sbjct: 462 GSSSTTPSYP 471
>12_02_0197 + 15392427-15392617,15392743-15393271
Length = 239
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = -2
Query: 192 GRMAGLRTHSGIGISLWGVLSEGVHIAERIVWANGWVESGWVLAGQSYRG 43
GR G+R H G+G WGV ++G RI A +E G + AG + RG
Sbjct: 90 GRYCGVRRHGGLGWLAWGV-ADG-----RIWPARQCLEEG-LEAGSAQRG 132
>05_01_0361 -
2824728-2826043,2826288-2826507,2827616-2827702,
2827726-2827980,2828704-2828733
Length = 635
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 140 PHREMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPYCW*IHKL 292
P + +P ++P AS +P+Y + +PA+ P P +HK+
Sbjct: 325 PRGQFTMPSSQDGLGLIPCYPEASPVLPRYFSPYPASFVPRRPLPVNVHKI 375
>04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220
Length = 1053
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 146 REMPIPEWVRNPAILPIARAASNSVPKYPADFPAALCPNYPY 271
+E+ PEW+ NP ++P A Y D A CP PY
Sbjct: 843 QEVIHPEWLANPVVVPKANGKLRMCIDY-TDLNKA-CPKDPY 882
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +2
Query: 65 STQPDSTQPFAQTIRSAMWTPSLSTPHREMPIPEWVRNPAILPIARAASNSVPKYPADFP 244
S+ P S+Q + P +P R P P +R+P P + + P PA P
Sbjct: 467 SSTPSSSQAMTTAAPAPPSPPEPPSP-RHQPSPPPLRSPPRQPTPPPSPSQQPPLPAPQP 525
Query: 245 AALCPNYP 268
P P
Sbjct: 526 VQASPTSP 533
>03_06_0581 +
34886728-34886817,34886990-34887175,34887332-34887543,
34888161-34888318,34888615-34888773,34888921-34888973,
34889265-34889405,34889788-34889823,34890542-34890776,
34891017-34891144
Length = 465
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 148 PVGCA*RGRPHRRTDSLGKWLGGVRLGTRGPELPRPE*G-WR 26
PVG G+ RR + GK G+R G P++ R E G W+
Sbjct: 420 PVGHGLGGQGARRVGNWGKIANGLRCGPIRPQVERKEGGEWK 461
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 PASTQPDSTQPFAQTIRSAMWTPSLSTPHREMPIPEWVRNPAILPIAR-AASNSVPKYPA 235
P+ST P T+ A P H +P+P V A +P+A AA+ P PA
Sbjct: 50 PSSTTPTPTRWGAGASAVPPRCPGPQDQHHGLPLPRPVSKSAPMPLASPAAAPPSPSPPA 109
Query: 236 DFPAA 250
AA
Sbjct: 110 CASAA 114
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 109 FCDVDALAKHTPQGNADTRMGAQPSHPANRSSCVE 213
F ALA+H PQGN DT + P R + VE
Sbjct: 23 FLAAQALAQHQPQGN-DTAAAGEGWRPRLRKTYVE 56
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 280 SPAVWVVRA*GSRKISRILGHRIRRSSSDWQ 188
+PAV V S+KI R++GHR +D+Q
Sbjct: 354 APAVKVTEVLTSKKIQRLVGHRRILQEADFQ 384
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,324,220
Number of Sequences: 37544
Number of extensions: 454683
Number of successful extensions: 1361
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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