Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5390
(336 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 3.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 3.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 3.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 3.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 7.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 7.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 7.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 7.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 7.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 9.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 9.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 9.2
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 3.0
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 207 YK*CYYNNAQNKTSNNKMY 151
YK YNN N NN Y
Sbjct: 89 YKYSNYNNYNNNNYNNNNY 107
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 3.0
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 207 YK*CYYNNAQNKTSNNKMY 151
YK YNN N NN Y
Sbjct: 89 YKYSNYNNYNNNNYNNNNY 107
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 3.0
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 207 YK*CYYNNAQNKTSNNKMY 151
YK YNN N NN Y
Sbjct: 89 YKYSNYNNYNNNNYNNNNY 107
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 3.0
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -1
Query: 207 YK*CYYNNAQNKTSNNKMY 151
YK YNN N NN Y
Sbjct: 89 YKYSNYNNYNNNNYNNNNY 107
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.2 bits (40), Expect = 7.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 260 ARMRFTKCFFFQFMTLFFIN 201
AR+ F +F F+T FFI+
Sbjct: 466 ARITFPVAYFM-FLTFFFIH 484
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 7.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 260 ARMRFTKCFFFQFMTLFFIN 201
AR+ F +F F+T FFI+
Sbjct: 452 ARITFPVAYFM-FLTFFFIH 470
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 7.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 260 ARMRFTKCFFFQFMTLFFIN 201
AR+ F +F F+T FFI+
Sbjct: 486 ARITFPVAYFM-FLTFFFIH 504
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.2 bits (40), Expect = 7.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 260 ARMRFTKCFFFQFMTLFFIN 201
AR+ F +F F+T FFI+
Sbjct: 435 ARITFPVAYFM-FLTFFFIH 453
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 7.0
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = +3
Query: 153 TFCCCSFCFE 182
TFCC +C +
Sbjct: 456 TFCCKGYCMD 465
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 207 YK*CYYNNAQNKTSNN 160
YK YNN N +NN
Sbjct: 89 YKYSNYNNYNNNYNNN 104
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 207 YK*CYYNNAQNKTSNN 160
YK YNN N +NN
Sbjct: 89 YKYSNYNNYNNNYNNN 104
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 207 YK*CYYNNAQNKTSNN 160
YK YNN N +NN
Sbjct: 322 YKYSNYNNYNNYNNNN 337
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,251
Number of Sequences: 438
Number of extensions: 1146
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7591023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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