Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5386
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010111-1|AAQ22580.1|  583|Drosophila melanogaster GH03827p pro...    31   1.3  
AE013599-3571|AAF46980.1|  898|Drosophila melanogaster CG9861-PA...    31   1.3  

>BT010111-1|AAQ22580.1|  583|Drosophila melanogaster GH03827p
           protein.
          Length = 583

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = +2

Query: 374 REWMVRGSDLLYKEKKKQRNRRRYYCLRLVLSTFVVHYTLAARHLSGLDR---AIDNRNF 544
           REW+ R     Y +K+ + +       R+     ++  + A+  L G+DR   + +N NF
Sbjct: 436 REWVKRRYGKTYSQKELEESIAE--SSRIFELVTILQSSPASPDLMGIDRLPRSKENFNF 493

Query: 545 FQIADNPA*LVRLSFHDGRNFR 610
           ++   N A L + ++HD  N R
Sbjct: 494 YKQIKNTAALAKQTYHDQLNAR 515


>AE013599-3571|AAF46980.1|  898|Drosophila melanogaster CG9861-PA
           protein.
          Length = 898

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = +2

Query: 374 REWMVRGSDLLYKEKKKQRNRRRYYCLRLVLSTFVVHYTLAARHLSGLDR---AIDNRNF 544
           REW+ R     Y +K+ + +       R+     ++  + A+  L G+DR   + +N NF
Sbjct: 751 REWVKRRYGKTYSQKELEESIAE--SSRIFELVTILQSSPASPDLMGIDRLPRSKENFNF 808

Query: 545 FQIADNPA*LVRLSFHDGRNFR 610
           ++   N A L + ++HD  N R
Sbjct: 809 YKQIKNTAALAKQTYHDQLNAR 830


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,229,728
Number of Sequences: 53049
Number of extensions: 585426
Number of successful extensions: 973
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)